Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AL354751.1-201ENST00000412768 1863 ntBASIC16.92■□□□□ 0.3
RAB3BP20337 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB3BP20337 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RAB3BP20337 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB3BP20337 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3BP20337 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 KRT19P1-201ENST00000405746 1186 ntBASIC16.91■□□□□ 0.3
RAB3BP20337 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB3BP20337 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 AC105020.6-201ENST00000621523 1217 ntBASIC16.91■□□□□ 0.3
RAB3BP20337 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.91■□□□□ 0.3
RAB3BP20337 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3BP20337 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB3BP20337 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB3BP20337 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB3BP20337 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB3BP20337 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB3BP20337 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 AC016405.3-201ENST00000607710 860 ntBASIC16.9■□□□□ 0.3
RAB3BP20337 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 NOC2LP1-202ENST00000452600 2235 ntBASIC16.9■□□□□ 0.3
RAB3BP20337 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB3BP20337 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3BP20337 HTR7P1-202ENST00000624664 4411 ntBASIC16.9■□□□□ 0.3
RAB3BP20337 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3BP20337 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB3BP20337 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB3BP20337 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.89■□□□□ 0.3
RAB3BP20337 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.89■□□□□ 0.3
RAB3BP20337 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB3BP20337 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.89■□□□□ 0.3
RAB3BP20337 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3BP20337 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAB3BP20337 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB3BP20337 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.89■□□□□ 0.29
RAB3BP20337 AC100791.3-201ENST00000617619 330 ntBASIC16.89■□□□□ 0.29
RAB3BP20337 NOC2LP2-201ENST00000407594 1944 ntBASIC16.89■□□□□ 0.29
RAB3BP20337 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RAB3BP20337 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB3BP20337 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3BP20337 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3BP20337 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB3BP20337 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms