Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDGFRAP16234 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.27■□□□□ 0.84
PDGFRAP16234 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 RPS2P4-201ENST00000476944 856 ntBASIC20.27■□□□□ 0.84
PDGFRAP16234 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.27■□□□□ 0.84
PDGFRAP16234 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.27■□□□□ 0.84
PDGFRAP16234 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDGFRAP16234 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDGFRAP16234 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDGFRAP16234 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDGFRAP16234 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDGFRAP16234 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.27■□□□□ 0.83
PDGFRAP16234 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.26■□□□□ 0.83
PDGFRAP16234 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDGFRAP16234 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.26■□□□□ 0.83
PDGFRAP16234 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.26■□□□□ 0.83
PDGFRAP16234 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDGFRAP16234 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
PDGFRAP16234 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 LINC01465-201ENST00000408887 1940 ntBASIC20.25■□□□□ 0.83
PDGFRAP16234 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDGFRAP16234 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.25■□□□□ 0.83
PDGFRAP16234 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.25■□□□□ 0.83
PDGFRAP16234 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
PDGFRAP16234 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDGFRAP16234 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PDGFRAP16234 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDGFRAP16234 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDGFRAP16234 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
PDGFRAP16234 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.24■□□□□ 0.83
PDGFRAP16234 Z99916.2-201ENST00000604037 246 ntBASIC20.24■□□□□ 0.83
PDGFRAP16234 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PDGFRAP16234 HLA-A-209ENST00000638375 975 ntBASIC20.24■□□□□ 0.83
PDGFRAP16234 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDGFRAP16234 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms