Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRAFP15056 AL049812.1-201ENST00000432563 2267 ntBASIC19.82■□□□□ 0.76
BRAFP15056 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRAFP15056 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 PTBP1P-201ENST00000554374 1601 ntBASIC19.81■□□□□ 0.76
BRAFP15056 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.81■□□□□ 0.76
BRAFP15056 POU5F1P3-201ENST00000428824 1078 ntBASIC19.81■□□□□ 0.76
BRAFP15056 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
BRAFP15056 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.81■□□□□ 0.76
BRAFP15056 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.81■□□□□ 0.76
BRAFP15056 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.81■□□□□ 0.76
BRAFP15056 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
BRAFP15056 AP001271.2-201ENST00000624018 1556 ntBASIC19.81■□□□□ 0.76
BRAFP15056 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
BRAFP15056 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.81■□□□□ 0.76
BRAFP15056 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
BRAFP15056 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BRAFP15056 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.81■□□□□ 0.76
BRAFP15056 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
BRAFP15056 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRAFP15056 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BRAFP15056 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.8■□□□□ 0.76
BRAFP15056 KRT8P17-201ENST00000453110 1448 ntBASIC19.8■□□□□ 0.76
BRAFP15056 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BRAFP15056 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BRAFP15056 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.8■□□□□ 0.76
BRAFP15056 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BRAFP15056 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRAFP15056 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
BRAFP15056 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
BRAFP15056 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 AC092368.3-202ENST00000574180 1591 ntBASIC19.79■□□□□ 0.76
BRAFP15056 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.79■□□□□ 0.76
BRAFP15056 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.79■□□□□ 0.76
BRAFP15056 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.79■□□□□ 0.76
BRAFP15056 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.79■□□□□ 0.76
BRAFP15056 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
BRAFP15056 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
BRAFP15056 PNMA6B-201ENST00000538162 1200 ntBASIC19.79■□□□□ 0.76
BRAFP15056 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.79■□□□□ 0.76
BRAFP15056 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRAFP15056 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.79■□□□□ 0.76
BRAFP15056 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRAFP15056 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
BRAFP15056 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRAFP15056 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRAFP15056 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.78■□□□□ 0.76
BRAFP15056 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRAFP15056 KRT16P6-202ENST00000425692 1426 ntBASIC19.78■□□□□ 0.76
BRAFP15056 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRAFP15056 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
BRAFP15056 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
BRAFP15056 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms