Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH1P12830 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CDH1P12830 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 TUBB8P6-201ENST00000436895 1288 ntBASIC18.81■□□□□ 0.6
CDH1P12830 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CDH1P12830 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH1P12830 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CDH1P12830 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDH1P12830 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDH1P12830 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH1P12830 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH1P12830 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH1P12830 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH1P12830 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 PRORSD1P-201ENST00000295112 541 ntBASIC18.8■□□□□ 0.6
CDH1P12830 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH1P12830 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH1P12830 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CDH1P12830 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH1P12830 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CDH1P12830 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH1P12830 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH1P12830 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH1P12830 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH1P12830 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH1P12830 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDH1P12830 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDH1P12830 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.79■□□□□ 0.6
CDH1P12830 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDH1P12830 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 KRT8P8-201ENST00000434750 1448 ntBASIC18.79■□□□□ 0.6
CDH1P12830 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH1P12830 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH1P12830 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH1P12830 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH1P12830 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH1P12830 AC133681.1-201ENST00000465482 601 ntBASIC18.78■□□□□ 0.6
CDH1P12830 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDH1P12830 RPPH1-201ENST00000516869 333 ntBASIC18.78■□□□□ 0.6
CDH1P12830 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.78■□□□□ 0.6
CDH1P12830 AC004264.1-201ENST00000608354 794 ntBASIC18.78■□□□□ 0.6
CDH1P12830 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms