Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNAP12004 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCNAP12004 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.78■□□□□ 0.6
PCNAP12004 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.78■□□□□ 0.6
PCNAP12004 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
PCNAP12004 POM121L13P-201ENST00000422362 380 ntBASIC18.78■□□□□ 0.6
PCNAP12004 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
PCNAP12004 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.78■□□□□ 0.6
PCNAP12004 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNAP12004 AP003097.1-201ENST00000530657 1135 ntBASIC18.78■□□□□ 0.6
PCNAP12004 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCNAP12004 KRT18P6-201ENST00000555540 1265 ntBASIC18.78■□□□□ 0.6
PCNAP12004 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.78■□□□□ 0.6
PCNAP12004 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.78■□□□□ 0.6
PCNAP12004 AL121829.2-201ENST00000620908 328 ntBASIC18.78■□□□□ 0.6
PCNAP12004 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.78■□□□□ 0.6
PCNAP12004 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNAP12004 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
PCNAP12004 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.77■□□□□ 0.6
PCNAP12004 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.77■□□□□ 0.6
PCNAP12004 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.77■□□□□ 0.6
PCNAP12004 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.77■□□□□ 0.6
PCNAP12004 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCNAP12004 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCNAP12004 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNAP12004 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCNAP12004 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCNAP12004 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PCNAP12004 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.77■□□□□ 0.59
PCNAP12004 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCNAP12004 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 YBX1P10-201ENST00000444752 975 ntBASIC18.76■□□□□ 0.59
PCNAP12004 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.76■□□□□ 0.59
PCNAP12004 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
PCNAP12004 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNAP12004 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.76■□□□□ 0.59
PCNAP12004 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.76■□□□□ 0.59
PCNAP12004 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
PCNAP12004 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCNAP12004 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCNAP12004 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNAP12004 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCNAP12004 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNAP12004 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms