Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.92■□□□□ 0.3
UBCP0CG48 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
UBCP0CG48 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
UBCP0CG48 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBCP0CG48 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UBCP0CG48 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.91■□□□□ 0.3
UBCP0CG48 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.91■□□□□ 0.3
UBCP0CG48 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.91■□□□□ 0.3
UBCP0CG48 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.91■□□□□ 0.3
UBCP0CG48 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBCP0CG48 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
UBCP0CG48 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBCP0CG48 AL138781.2-201ENST00000617896 1843 ntBASIC16.91■□□□□ 0.3
UBCP0CG48 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UBCP0CG48 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.91■□□□□ 0.3
UBCP0CG48 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBCP0CG48 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.9■□□□□ 0.3
UBCP0CG48 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBCP0CG48 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 MIR663A-201ENST00000385250 93 ntBASIC16.9■□□□□ 0.3
UBCP0CG48 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.9■□□□□ 0.3
UBCP0CG48 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.9■□□□□ 0.3
UBCP0CG48 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
UBCP0CG48 AL050303.2-201ENST00000619798 666 ntBASIC16.9■□□□□ 0.3
UBCP0CG48 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBCP0CG48 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.9■□□□□ 0.3
UBCP0CG48 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
UBCP0CG48 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.89■□□□□ 0.3
UBCP0CG48 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UBCP0CG48 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.89■□□□□ 0.29
UBCP0CG48 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.89■□□□□ 0.29
UBCP0CG48 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
UBCP0CG48 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 AC026185.1-201ENST00000445748 174 ntBASIC16.89■□□□□ 0.29
UBCP0CG48 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.89■□□□□ 0.29
UBCP0CG48 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.89■□□□□ 0.29
UBCP0CG48 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.89■□□□□ 0.29
UBCP0CG48 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.29
UBCP0CG48 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBCP0CG48 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.89■□□□□ 0.29
UBCP0CG48 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.89■□□□□ 0.29
UBCP0CG48 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms