Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SP9P0CG40 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.06■□□□□ 0.64
SP9P0CG40 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SP9P0CG40 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.06■□□□□ 0.64
SP9P0CG40 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.06■□□□□ 0.64
SP9P0CG40 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.06■□□□□ 0.64
SP9P0CG40 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SP9P0CG40 TOB2P1-201ENST00000469761 992 ntBASIC19.06■□□□□ 0.64
SP9P0CG40 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 AF228730.7-201ENST00000641842 219 ntBASIC19.06■□□□□ 0.64
SP9P0CG40 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SP9P0CG40 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
SP9P0CG40 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 MIR574-201ENST00000385209 96 ntBASIC19.05■□□□□ 0.64
SP9P0CG40 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SP9P0CG40 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SP9P0CG40 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.05■□□□□ 0.64
SP9P0CG40 KRT16P4-201ENST00000453883 522 ntBASIC19.05■□□□□ 0.64
SP9P0CG40 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SP9P0CG40 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.05■□□□□ 0.64
SP9P0CG40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.05■□□□□ 0.64
SP9P0CG40 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.05■□□□□ 0.64
SP9P0CG40 AC079602.3-201ENST00000623931 403 ntBASIC19.05■□□□□ 0.64
SP9P0CG40 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SP9P0CG40 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.05■□□□□ 0.64
SP9P0CG40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SP9P0CG40 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SP9P0CG40 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
SP9P0CG40 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.04■□□□□ 0.64
SP9P0CG40 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SP9P0CG40 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
SP9P0CG40 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.04■□□□□ 0.64
SP9P0CG40 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SP9P0CG40 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.04■□□□□ 0.64
SP9P0CG40 HLA-F-220ENST00000434407 884 ntBASIC19.04■□□□□ 0.64
SP9P0CG40 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.04■□□□□ 0.64
SP9P0CG40 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.04■□□□□ 0.64
SP9P0CG40 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SP9P0CG40 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SP9P0CG40 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SP9P0CG40 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.03■□□□□ 0.64
SP9P0CG40 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SP9P0CG40 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.03■□□□□ 0.64
SP9P0CG40 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
SP9P0CG40 TSPY12P-201ENST00000421279 868 ntBASIC19.03■□□□□ 0.64
SP9P0CG40 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.03■□□□□ 0.64
SP9P0CG40 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SP9P0CG40 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SP9P0CG40 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.03■□□□□ 0.64
SP9P0CG40 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SP9P0CG40 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.02■□□□□ 0.64
SP9P0CG40 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SP9P0CG40 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SP9P0CG40 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.02■□□□□ 0.64
SP9P0CG40 MIR662-201ENST00000384847 95 ntBASIC19.02■□□□□ 0.64
SP9P0CG40 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SP9P0CG40 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SP9P0CG40 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.02■□□□□ 0.64
SP9P0CG40 AC092183.1-201ENST00000469884 875 ntBASIC19.02■□□□□ 0.64
SP9P0CG40 AC104819.1-201ENST00000504587 486 ntBASIC19.02■□□□□ 0.64
SP9P0CG40 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.02■□□□□ 0.64
SP9P0CG40 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms