Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.33■□□□□ 0.52
CTSBP07858 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.33■□□□□ 0.52
CTSBP07858 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.33■□□□□ 0.52
CTSBP07858 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.33■□□□□ 0.52
CTSBP07858 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSBP07858 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSBP07858 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.32■□□□□ 0.52
CTSBP07858 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 Z82202.1-201ENST00000623446 1880 ntBASIC18.32■□□□□ 0.52
CTSBP07858 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTSBP07858 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTSBP07858 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.32■□□□□ 0.52
CTSBP07858 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CTSBP07858 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTSBP07858 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTSBP07858 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.31■□□□□ 0.52
CTSBP07858 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.31■□□□□ 0.52
CTSBP07858 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CTSBP07858 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTSBP07858 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.31■□□□□ 0.52
CTSBP07858 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.31■□□□□ 0.52
CTSBP07858 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 AC096733.2-201ENST00000609937 1394 ntBASIC18.3■□□□□ 0.52
CTSBP07858 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTSBP07858 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CTSBP07858 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSBP07858 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSBP07858 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.3■□□□□ 0.52
CTSBP07858 FAM210CP-201ENST00000445714 574 ntBASIC18.3■□□□□ 0.52
CTSBP07858 ECEL1P2-202ENST00000465689 757 ntBASIC18.3■□□□□ 0.52
CTSBP07858 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
CTSBP07858 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.3■□□□□ 0.52
CTSBP07858 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTSBP07858 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTSBP07858 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CTSBP07858 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CTSBP07858 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 KRT8P11-201ENST00000409686 1436 ntBASIC18.3■□□□□ 0.52
CTSBP07858 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTSBP07858 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSBP07858 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSBP07858 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CTSBP07858 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.29■□□□□ 0.52
CTSBP07858 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.29■□□□□ 0.52
CTSBP07858 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSBP07858 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CTSBP07858 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTSBP07858 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms