Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRAP04437 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TCRAP04437 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRAP04437 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TCRAP04437 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRAP04437 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRAP04437 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRAP04437 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRAP04437 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 AC018470.1-201ENST00000624790 3129 ntBASIC14.7□□□□□ -0.06
TCRAP04437 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRAP04437 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRAP04437 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.69□□□□□ -0.06
TCRAP04437 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 CYP2T3P-201ENST00000601990 817 ntBASIC14.69□□□□□ -0.06
TCRAP04437 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.69□□□□□ -0.06
TCRAP04437 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRAP04437 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRAP04437 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRAP04437 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRAP04437 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRAP04437 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 FP475955.4-201ENST00000623131 1990 ntBASIC14.68□□□□□ -0.06
TCRAP04437 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.68□□□□□ -0.06
TCRAP04437 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRAP04437 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TCRAP04437 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 C2orf69P4-201ENST00000565394 541 ntBASIC14.68□□□□□ -0.06
TCRAP04437 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRAP04437 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRAP04437 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
TCRAP04437 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TCRAP04437 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRAP04437 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TCRAP04437 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRAP04437 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRAP04437 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRAP04437 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TCRAP04437 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms