Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AP000692.2-201ENST00000608391 879 ntBASIC17.66■□□□□ 0.42
P04436 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.66■□□□□ 0.42
P04436 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04436 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P04436 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.66■□□□□ 0.42
P04436 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.66■□□□□ 0.42
P04436 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
P04436 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
P04436 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
P04436 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
P04436 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
P04436 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.65■□□□□ 0.42
P04436 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.65■□□□□ 0.42
P04436 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.65■□□□□ 0.42
P04436 AC091390.4-202ENST00000476426 537 ntBASIC17.65■□□□□ 0.42
P04436 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.65■□□□□ 0.42
P04436 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.65■□□□□ 0.42
P04436 C2orf69P3-201ENST00000565542 1120 ntBASIC17.65■□□□□ 0.42
P04436 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.65■□□□□ 0.42
P04436 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.65■□□□□ 0.42
P04436 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
P04436 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.65■□□□□ 0.42
P04436 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
P04436 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
P04436 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P04436 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
P04436 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.65■□□□□ 0.42
P04436 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.64■□□□□ 0.42
P04436 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.64■□□□□ 0.42
P04436 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.42
P04436 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
P04436 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P04436 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
P04436 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P04436 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.64■□□□□ 0.42
P04436 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
P04436 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04436 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04436 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
P04436 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.64■□□□□ 0.41
P04436 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04436 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.64■□□□□ 0.41
P04436 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.64■□□□□ 0.41
P04436 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.64■□□□□ 0.41
P04436 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04436 AP005242.2-201ENST00000580065 1175 ntBASIC17.64■□□□□ 0.41
P04436 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.64■□□□□ 0.41
P04436 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
P04436 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
P04436 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
P04436 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P04436 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.63■□□□□ 0.41
P04436 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
P04436 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.63■□□□□ 0.41
P04436 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
P04436 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
P04436 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.63■□□□□ 0.41
P04436 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 AC097493.4-201ENST00000641197 219 ntBASIC17.63■□□□□ 0.41
P04436 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 LINC01568-207ENST00000641790 1380 ntBASIC17.63■□□□□ 0.41
P04436 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 KRT8P9-201ENST00000558927 1449 ntBASIC17.63■□□□□ 0.41
P04436 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.63■□□□□ 0.41
P04436 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
P04436 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms