Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.23■□□□□ 0.19
CD74P04233 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD74P04233 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD74P04233 MKRN4P-201ENST00000444706 1521 ntBASIC16.23■□□□□ 0.19
CD74P04233 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CD74P04233 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD74P04233 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD74P04233 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CD74P04233 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CD74P04233 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CD74P04233 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.22■□□□□ 0.19
CD74P04233 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.22■□□□□ 0.19
CD74P04233 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.22■□□□□ 0.19
CD74P04233 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.22■□□□□ 0.19
CD74P04233 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
CD74P04233 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.22■□□□□ 0.19
CD74P04233 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD74P04233 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
CD74P04233 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
CD74P04233 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.21■□□□□ 0.19
CD74P04233 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.21■□□□□ 0.19
CD74P04233 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CD74P04233 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
CD74P04233 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.21■□□□□ 0.19
CD74P04233 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CD74P04233 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.21■□□□□ 0.19
CD74P04233 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.21■□□□□ 0.19
CD74P04233 RARRES2P4-201ENST00000514074 484 ntBASIC16.21■□□□□ 0.19
CD74P04233 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.21■□□□□ 0.19
CD74P04233 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 ANO7L1-203ENST00000602586 1720 ntBASIC16.21■□□□□ 0.19
CD74P04233 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.21■□□□□ 0.19
CD74P04233 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD74P04233 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
CD74P04233 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CD74P04233 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CD74P04233 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD74P04233 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CD74P04233 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD74P04233 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD74P04233 AC104417.2-201ENST00000562989 1793 ntBASIC16.21■□□□□ 0.18
CD74P04233 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.21■□□□□ 0.18
CD74P04233 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD74P04233 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 SDHAP1-207ENST00000440850 2000 ntBASIC16.2■□□□□ 0.18
CD74P04233 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 KRT18P14-201ENST00000534205 1250 ntBASIC16.2■□□□□ 0.18
CD74P04233 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 TFP1-202ENST00000475455 1573 ntBASIC16.2■□□□□ 0.18
CD74P04233 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD74P04233 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD74P04233 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD74P04233 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD74P04233 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD74P04233 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.2■□□□□ 0.18
CD74P04233 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD74P04233 AC020763.4-201ENST00000623414 4170 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms