Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.88■□□□□ 0.29
LCATP04180 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.88■□□□□ 0.29
LCATP04180 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCATP04180 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCATP04180 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCATP04180 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.88■□□□□ 0.29
LCATP04180 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.88■□□□□ 0.29
LCATP04180 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LCATP04180 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.87■□□□□ 0.29
LCATP04180 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.87■□□□□ 0.29
LCATP04180 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.87■□□□□ 0.29
LCATP04180 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.87■□□□□ 0.29
LCATP04180 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.87■□□□□ 0.29
LCATP04180 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 ZNF815P-204ENST00000434898 1737 ntBASIC16.87■□□□□ 0.29
LCATP04180 AC087289.5-201ENST00000586076 3175 ntBASIC16.87■□□□□ 0.29
LCATP04180 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
LCATP04180 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCATP04180 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LCATP04180 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LCATP04180 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LCATP04180 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.86■□□□□ 0.29
LCATP04180 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.86■□□□□ 0.29
LCATP04180 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.86■□□□□ 0.29
LCATP04180 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 KRT18P16-201ENST00000510337 1294 ntBASIC16.86■□□□□ 0.29
LCATP04180 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.86■□□□□ 0.29
LCATP04180 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.86■□□□□ 0.29
LCATP04180 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.86■□□□□ 0.29
LCATP04180 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LCATP04180 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LCATP04180 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LCATP04180 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.85■□□□□ 0.29
LCATP04180 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LCATP04180 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LCATP04180 ESRRAP1-201ENST00000400596 1257 ntBASIC16.85■□□□□ 0.29
LCATP04180 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.85■□□□□ 0.29
LCATP04180 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.85■□□□□ 0.29
LCATP04180 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.85■□□□□ 0.29
LCATP04180 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.85■□□□□ 0.29
LCATP04180 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LCATP04180 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms