Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CSPG5O95196 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSPG5O95196 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CSPG5O95196 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CSPG5O95196 Z85996.1-201ENST00000494644 937 ntBASIC20.72■□□□□ 0.91
CSPG5O95196 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.72■□□□□ 0.91
CSPG5O95196 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSPG5O95196 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.72■□□□□ 0.91
CSPG5O95196 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.72■□□□□ 0.91
CSPG5O95196 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.72■□□□□ 0.91
CSPG5O95196 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSPG5O95196 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CSPG5O95196 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.72■□□□□ 0.91
CSPG5O95196 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.72■□□□□ 0.91
CSPG5O95196 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CSPG5O95196 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
CSPG5O95196 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CSPG5O95196 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.71■□□□□ 0.91
CSPG5O95196 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CSPG5O95196 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.71■□□□□ 0.91
CSPG5O95196 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 KRT18P38-201ENST00000449496 1282 ntBASIC20.71■□□□□ 0.91
CSPG5O95196 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CSPG5O95196 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.71■□□□□ 0.91
CSPG5O95196 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CSPG5O95196 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CSPG5O95196 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSPG5O95196 TMEM179-206ENST00000616017 1645 ntBASIC20.71■□□□□ 0.91
CSPG5O95196 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
CSPG5O95196 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.7■□□□□ 0.9
CSPG5O95196 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
CSPG5O95196 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CSPG5O95196 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.7■□□□□ 0.9
CSPG5O95196 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.7■□□□□ 0.9
CSPG5O95196 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CSPG5O95196 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.7■□□□□ 0.9
CSPG5O95196 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.7■□□□□ 0.9
CSPG5O95196 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.7■□□□□ 0.9
CSPG5O95196 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSPG5O95196 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSPG5O95196 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
CSPG5O95196 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CSPG5O95196 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 AC026396.1-201ENST00000419388 421 ntBASIC20.69■□□□□ 0.9
CSPG5O95196 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.69■□□□□ 0.9
CSPG5O95196 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.69■□□□□ 0.9
CSPG5O95196 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 CLEC4GP1-201ENST00000596555 870 ntBASIC20.69■□□□□ 0.9
CSPG5O95196 AC010653.2-201ENST00000623505 997 ntBASIC20.69■□□□□ 0.9
CSPG5O95196 AL121956.5-201ENST00000625261 221 ntBASIC20.69■□□□□ 0.9
CSPG5O95196 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.69■□□□□ 0.9
CSPG5O95196 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CSPG5O95196 AC005332.1-201ENST00000577698 1310 ntBASIC20.69■□□□□ 0.9
CSPG5O95196 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSPG5O95196 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.68■□□□□ 0.9
CSPG5O95196 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.68■□□□□ 0.9
CSPG5O95196 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSPG5O95196 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG5O95196 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.68■□□□□ 0.9
CSPG5O95196 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.68■□□□□ 0.9
CSPG5O95196 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.68■□□□□ 0.9
CSPG5O95196 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms