Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
LTN1O94822 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
LTN1O94822 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.67■■□□□ 1.7
LTN1O94822 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.67■■□□□ 1.7
LTN1O94822 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.67■■□□□ 1.7
LTN1O94822 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.67■■□□□ 1.7
LTN1O94822 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.67■■□□□ 1.7
LTN1O94822 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
LTN1O94822 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
LTN1O94822 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.66■■□□□ 1.7
LTN1O94822 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.66■■□□□ 1.7
LTN1O94822 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTN1O94822 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.65■■□□□ 1.7
LTN1O94822 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC25.65■■□□□ 1.7
LTN1O94822 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
LTN1O94822 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.65■■□□□ 1.7
LTN1O94822 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.65■■□□□ 1.7
LTN1O94822 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.65■■□□□ 1.7
LTN1O94822 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LTN1O94822 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.65■■□□□ 1.7
LTN1O94822 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
LTN1O94822 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LTN1O94822 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LTN1O94822 AL645929.1-201ENST00000420084 975 ntBASIC25.64■■□□□ 1.7
LTN1O94822 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC25.64■■□□□ 1.7
LTN1O94822 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LTN1O94822 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC25.64■■□□□ 1.7
LTN1O94822 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LTN1O94822 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
LTN1O94822 NPAP1P7-201ENST00000613027 823 ntBASIC25.64■■□□□ 1.7
LTN1O94822 AL031432.5-201ENST00000641059 760 ntBASIC25.64■■□□□ 1.7
LTN1O94822 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
LTN1O94822 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
LTN1O94822 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LTN1O94822 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.64■■□□□ 1.69
LTN1O94822 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.64■■□□□ 1.69
LTN1O94822 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LTN1O94822 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC25.64■■□□□ 1.69
LTN1O94822 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LTN1O94822 LINC01311-201ENST00000565162 1445 ntBASIC25.64■■□□□ 1.69
LTN1O94822 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
LTN1O94822 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.64■■□□□ 1.69
LTN1O94822 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.64■■□□□ 1.69
LTN1O94822 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.64■■□□□ 1.69
LTN1O94822 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.69
LTN1O94822 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
LTN1O94822 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC25.64■■□□□ 1.69
LTN1O94822 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LTN1O94822 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.63■■□□□ 1.69
LTN1O94822 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.63■■□□□ 1.69
LTN1O94822 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LTN1O94822 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC25.63■■□□□ 1.69
LTN1O94822 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 AL450487.1-201ENST00000426799 995 ntBASIC25.63■■□□□ 1.69
LTN1O94822 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.63■■□□□ 1.69
LTN1O94822 CLEC4GP1-201ENST00000596555 870 ntBASIC25.63■■□□□ 1.69
LTN1O94822 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LTN1O94822 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.63■■□□□ 1.69
LTN1O94822 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.63■■□□□ 1.69
LTN1O94822 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTN1O94822 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
LTN1O94822 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC25.62■■□□□ 1.69
LTN1O94822 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
LTN1O94822 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.62■■□□□ 1.69
LTN1O94822 TSPY21P-201ENST00000433481 731 ntBASIC25.62■■□□□ 1.69
LTN1O94822 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.62■■□□□ 1.69
LTN1O94822 AL136038.3-201ENST00000561909 1096 ntBASIC25.62■■□□□ 1.69
LTN1O94822 GPAT2P1-201ENST00000444924 1672 ntBASIC25.62■■□□□ 1.69
LTN1O94822 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LTN1O94822 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.62■■□□□ 1.69
LTN1O94822 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.62■■□□□ 1.69
LTN1O94822 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms