Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.8■■□□□ 1.56
PTCD1O75127 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.8■■□□□ 1.56
PTCD1O75127 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.8■■□□□ 1.56
PTCD1O75127 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PTCD1O75127 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 AP005212.1-201ENST00000581547 1997 ntBASIC24.8■■□□□ 1.56
PTCD1O75127 AC009237.14-201ENST00000609975 1594 ntBASIC24.8■■□□□ 1.56
PTCD1O75127 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD1O75127 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD1O75127 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.79■■□□□ 1.56
PTCD1O75127 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD1O75127 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.79■■□□□ 1.56
PTCD1O75127 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.79■■□□□ 1.56
PTCD1O75127 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.79■■□□□ 1.56
PTCD1O75127 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.79■■□□□ 1.56
PTCD1O75127 AC116407.4-201ENST00000623319 1061 ntBASIC24.79■■□□□ 1.56
PTCD1O75127 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.79■■□□□ 1.56
PTCD1O75127 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.79■■□□□ 1.56
PTCD1O75127 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PTCD1O75127 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCD1O75127 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.79■■□□□ 1.56
PTCD1O75127 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PTCD1O75127 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCD1O75127 KRT18P48-201ENST00000434763 852 ntBASIC24.78■■□□□ 1.56
PTCD1O75127 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.78■■□□□ 1.56
PTCD1O75127 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.78■■□□□ 1.56
PTCD1O75127 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
PTCD1O75127 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PTCD1O75127 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCD1O75127 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PTCD1O75127 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD1O75127 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.77■■□□□ 1.56
PTCD1O75127 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCD1O75127 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.77■■□□□ 1.56
PTCD1O75127 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD1O75127 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD1O75127 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCD1O75127 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.77■■□□□ 1.56
PTCD1O75127 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PTCD1O75127 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCD1O75127 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD1O75127 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD1O75127 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.76■■□□□ 1.55
PTCD1O75127 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD1O75127 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.76■■□□□ 1.55
PTCD1O75127 DUSP5P1-201ENST00000441325 1139 ntBASIC24.76■■□□□ 1.55
PTCD1O75127 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCD1O75127 AC112907.2-201ENST00000448639 330 ntBASIC24.76■■□□□ 1.55
PTCD1O75127 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD1O75127 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCD1O75127 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 GCSHP2-201ENST00000560971 527 ntBASIC24.76■■□□□ 1.55
PTCD1O75127 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCD1O75127 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PTCD1O75127 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.76■■□□□ 1.55
PTCD1O75127 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
PTCD1O75127 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCD1O75127 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCD1O75127 VENTXP5-201ENST00000523979 775 ntBASIC24.75■■□□□ 1.55
PTCD1O75127 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.75■■□□□ 1.55
PTCD1O75127 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.75■■□□□ 1.55
PTCD1O75127 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.75■■□□□ 1.55
PTCD1O75127 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCD1O75127 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
PTCD1O75127 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms