Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
PRAMEF11O60813 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 B3GAT3P1-201ENST00000471720 806 ntBASIC19.62■□□□□ 0.73
PRAMEF11O60813 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 MIR4785-201ENST00000585005 73 ntBASIC19.62■□□□□ 0.73
PRAMEF11O60813 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEF11O60813 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF11O60813 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 FSCN1P1-201ENST00000568912 1481 ntBASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 AP003071.4-201ENST00000562276 1284 ntBASIC19.61■□□□□ 0.73
PRAMEF11O60813 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 REXO1L10P-201ENST00000615707 1290 ntBASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC130371.2-201ENST00000619443 611 ntBASIC19.61■□□□□ 0.73
PRAMEF11O60813 REXO1L12P-201ENST00000622156 912 ntBASIC19.61■□□□□ 0.73
PRAMEF11O60813 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF11O60813 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF11O60813 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
PRAMEF11O60813 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 AL032819.2-201ENST00000624543 2162 ntBASIC19.6■□□□□ 0.73
PRAMEF11O60813 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 AC008040.2-201ENST00000461049 708 ntBASIC19.6■□□□□ 0.73
PRAMEF11O60813 AC091390.4-202ENST00000476426 537 ntBASIC19.6■□□□□ 0.73
PRAMEF11O60813 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRAMEF11O60813 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF11O60813 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 AC011298.2-201ENST00000617989 482 ntBASIC19.59■□□□□ 0.73
PRAMEF11O60813 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 AC005332.7-201ENST00000614046 2005 ntBASIC19.59■□□□□ 0.73
PRAMEF11O60813 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEF11O60813 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF11O60813 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF11O60813 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PRAMEF11O60813 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.58■□□□□ 0.73
PRAMEF11O60813 KRT17P2-201ENST00000300992 1314 ntBASIC19.58■□□□□ 0.73
PRAMEF11O60813 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEF11O60813 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.58■□□□□ 0.73
PRAMEF11O60813 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms