Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 TNXA-203ENST00000507684 2038 ntBASIC18.59■□□□□ 0.57
PRAMEF4O60810 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 KRT16P5-201ENST00000455284 522 ntBASIC18.59■□□□□ 0.57
PRAMEF4O60810 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 AC110285.5-201ENST00000611501 352 ntBASIC18.59■□□□□ 0.57
PRAMEF4O60810 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF4O60810 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF4O60810 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF4O60810 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF4O60810 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
PRAMEF4O60810 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF4O60810 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.58■□□□□ 0.57
PRAMEF4O60810 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF4O60810 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 AC004264.1-201ENST00000608354 794 ntBASIC18.58■□□□□ 0.56
PRAMEF4O60810 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF4O60810 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PRAMEF4O60810 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 FP475955.4-201ENST00000623131 1990 ntBASIC18.57■□□□□ 0.56
PRAMEF4O60810 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 RPPH1-201ENST00000516869 333 ntBASIC18.57■□□□□ 0.56
PRAMEF4O60810 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 C1QBPP2-201ENST00000528754 825 ntBASIC18.57■□□□□ 0.56
PRAMEF4O60810 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF4O60810 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PRAMEF4O60810 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 PRORSD1P-201ENST00000295112 541 ntBASIC18.56■□□□□ 0.56
PRAMEF4O60810 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF4O60810 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 ITM2C-210ENST00000620962 501 ntBASIC18.56■□□□□ 0.56
PRAMEF4O60810 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF4O60810 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms