Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCN1O60741 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.03■□□□□ 0.48
HCN1O60741 MIR4497-201ENST00000583208 89 ntBASIC18.03■□□□□ 0.48
HCN1O60741 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.03■□□□□ 0.48
HCN1O60741 TREX1-205ENST00000625293 1783 ntBASIC18.03■□□□□ 0.48
HCN1O60741 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.03■□□□□ 0.48
HCN1O60741 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCN1O60741 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
HCN1O60741 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
HCN1O60741 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.02■□□□□ 0.48
HCN1O60741 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HCN1O60741 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HCN1O60741 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HCN1O60741 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.02■□□□□ 0.48
HCN1O60741 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.02■□□□□ 0.48
HCN1O60741 RARRES2P10-201ENST00000564312 460 ntBASIC18.02■□□□□ 0.48
HCN1O60741 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.02■□□□□ 0.48
HCN1O60741 AC233702.5-201ENST00000584107 538 ntBASIC18.02■□□□□ 0.48
HCN1O60741 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCN1O60741 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HCN1O60741 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCN1O60741 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HCN1O60741 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 RPS2P55-201ENST00000397318 883 ntBASIC18.01■□□□□ 0.47
HCN1O60741 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 AC107956.1-201ENST00000494359 873 ntBASIC18.01■□□□□ 0.47
HCN1O60741 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.01■□□□□ 0.47
HCN1O60741 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.01■□□□□ 0.47
HCN1O60741 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HCN1O60741 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCN1O60741 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.01■□□□□ 0.47
HCN1O60741 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HCN1O60741 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18■□□□□ 0.47
HCN1O60741 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18■□□□□ 0.47
HCN1O60741 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
HCN1O60741 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18■□□□□ 0.47
HCN1O60741 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18■□□□□ 0.47
HCN1O60741 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms