Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNT1O60563 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNT1O60563 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCNT1O60563 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNT1O60563 FAM197Y1-201ENST00000421178 764 ntBASIC21.95■■□□□ 1.1
CCNT1O60563 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCNT1O60563 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNT1O60563 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCNT1O60563 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNT1O60563 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNT1O60563 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNT1O60563 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNT1O60563 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 AC005332.7-201ENST00000614046 2005 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNT1O60563 AL032819.2-201ENST00000624543 2162 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNT1O60563 AC004980.1-204ENST00000429707 299 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.94■■□□□ 1.1
CCNT1O60563 CD177P1-201ENST00000606252 935 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 AC113410.3-201ENST00000623366 203 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 AL049637.2-201ENST00000641778 930 ntBASIC21.94■■□□□ 1.1
CCNT1O60563 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCNT1O60563 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNT1O60563 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNT1O60563 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCNT1O60563 MIR718-201ENST00000390190 70 ntBASIC21.93■■□□□ 1.1
CCNT1O60563 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNT1O60563 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNT1O60563 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.93■■□□□ 1.1
CCNT1O60563 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNT1O60563 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNT1O60563 AP001412.1-201ENST00000608405 714 ntBASIC21.93■■□□□ 1.1
CCNT1O60563 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNT1O60563 AC131212.4-201ENST00000623606 975 ntBASIC21.93■■□□□ 1.1
CCNT1O60563 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNT1O60563 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.92■■□□□ 1.1
CCNT1O60563 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.92■■□□□ 1.1
CCNT1O60563 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.92■■□□□ 1.1
CCNT1O60563 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.92■■□□□ 1.1
CCNT1O60563 AC066615.1-201ENST00000640911 628 ntBASIC21.92■■□□□ 1.1
CCNT1O60563 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNT1O60563 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNT1O60563 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNT1O60563 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNT1O60563 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNT1O60563 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNT1O60563 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNT1O60563 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms