Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 AC011298.2-201ENST00000617989 482 ntBASIC19.14■□□□□ 0.65
PCDHGA12O60330 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 AC096733.2-201ENST00000609937 1394 ntBASIC19.14■□□□□ 0.65
PCDHGA12O60330 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA12O60330 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA12O60330 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 FAM8A6P-201ENST00000407496 1135 ntBASIC19.13■□□□□ 0.65
PCDHGA12O60330 AC004951.3-201ENST00000418645 1148 ntBASIC19.13■□□□□ 0.65
PCDHGA12O60330 SLC25A1P2-201ENST00000430693 912 ntBASIC19.13■□□□□ 0.65
PCDHGA12O60330 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 CCR12P-201ENST00000446203 998 ntBASIC19.13■□□□□ 0.65
PCDHGA12O60330 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 AL138966.2-201ENST00000621997 464 ntBASIC19.13■□□□□ 0.65
PCDHGA12O60330 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA12O60330 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCDHGA12O60330 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 AC117947.1-201ENST00000427448 529 ntBASIC19.12■□□□□ 0.65
PCDHGA12O60330 AC091390.4-202ENST00000476426 537 ntBASIC19.12■□□□□ 0.65
PCDHGA12O60330 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA12O60330 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA12O60330 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 RNF152P1-201ENST00000397754 604 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 AC010653.2-201ENST00000623505 997 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 HLA-A-209ENST00000638375 975 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 MYC-208ENST00000641036 567 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA12O60330 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms