Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
IDH3BO43837 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 PCDHB18P-201ENST00000524813 2368 ntBASIC17.69■□□□□ 0.42
IDH3BO43837 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IDH3BO43837 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.69■□□□□ 0.42
IDH3BO43837 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
IDH3BO43837 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IDH3BO43837 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
IDH3BO43837 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.68■□□□□ 0.42
IDH3BO43837 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.68■□□□□ 0.42
IDH3BO43837 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.68■□□□□ 0.42
IDH3BO43837 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 AC133552.2-202ENST00000575694 574 ntBASIC17.68■□□□□ 0.42
IDH3BO43837 MIR5787-201ENST00000611784 55 ntBASIC17.68■□□□□ 0.42
IDH3BO43837 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.68■□□□□ 0.42
IDH3BO43837 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 AL133373.2-201ENST00000623187 2828 ntBASIC17.68■□□□□ 0.42
IDH3BO43837 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IDH3BO43837 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IDH3BO43837 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
IDH3BO43837 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IDH3BO43837 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IDH3BO43837 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 KRT17P1-201ENST00000399211 1546 ntBASIC17.67■□□□□ 0.42
IDH3BO43837 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IDH3BO43837 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.67■□□□□ 0.42
IDH3BO43837 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 LSM12P1-201ENST00000411836 588 ntBASIC17.67■□□□□ 0.42
IDH3BO43837 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.67■□□□□ 0.42
IDH3BO43837 AC005181.1-201ENST00000604782 1256 ntBASIC17.67■□□□□ 0.42
IDH3BO43837 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.67■□□□□ 0.42
IDH3BO43837 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.67■□□□□ 0.42
IDH3BO43837 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IDH3BO43837 AP000997.3-201ENST00000623333 2250 ntBASIC17.67■□□□□ 0.42
IDH3BO43837 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
IDH3BO43837 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IDH3BO43837 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
IDH3BO43837 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.66■□□□□ 0.42
IDH3BO43837 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 AL162430.1-201ENST00000480705 870 ntBASIC17.66■□□□□ 0.42
IDH3BO43837 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.66■□□□□ 0.42
IDH3BO43837 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
IDH3BO43837 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IDH3BO43837 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.66■□□□□ 0.42
IDH3BO43837 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms