Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF13O43567 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF13O43567 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF13O43567 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF13O43567 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF13O43567 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF13O43567 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF13O43567 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF13O43567 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF13O43567 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF13O43567 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF13O43567 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF13O43567 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RNF13O43567 LINC01465-201ENST00000408887 1940 ntBASIC17.57■□□□□ 0.4
RNF13O43567 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF13O43567 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RNF13O43567 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF13O43567 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF13O43567 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF13O43567 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF13O43567 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF13O43567 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF13O43567 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF13O43567 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
RNF13O43567 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF13O43567 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF13O43567 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF13O43567 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF13O43567 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF13O43567 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF13O43567 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 AC120498.8-201ENST00000614275 531 ntBASIC17.55■□□□□ 0.4
RNF13O43567 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 AP006587.1-201ENST00000534129 1502 ntBASIC17.55■□□□□ 0.4
RNF13O43567 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.55■□□□□ 0.4
RNF13O43567 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF13O43567 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF13O43567 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF13O43567 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF13O43567 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF13O43567 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF13O43567 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF13O43567 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF13O43567 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RNF13O43567 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 ID1-201ENST00000376105 1233 ntBASIC17.54■□□□□ 0.4
RNF13O43567 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF13O43567 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF13O43567 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF13O43567 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms