Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 AC063952.2-201ENST00000498792 1227 ntBASIC19.51■□□□□ 0.71
NPC1O15118 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 NTF6B-201ENST00000591913 560 ntBASIC19.51■□□□□ 0.71
NPC1O15118 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.51■□□□□ 0.71
NPC1O15118 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NPC1O15118 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
NPC1O15118 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
NPC1O15118 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.51■□□□□ 0.71
NPC1O15118 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPC1O15118 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.51■□□□□ 0.71
NPC1O15118 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NPC1O15118 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
NPC1O15118 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NPC1O15118 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPC1O15118 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.5■□□□□ 0.71
NPC1O15118 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 RNF152P1-201ENST00000397754 604 ntBASIC19.5■□□□□ 0.71
NPC1O15118 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.5■□□□□ 0.71
NPC1O15118 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPC1O15118 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.5■□□□□ 0.71
NPC1O15118 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
NPC1O15118 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.5■□□□□ 0.71
NPC1O15118 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPC1O15118 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPC1O15118 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1O15118 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.49■□□□□ 0.71
NPC1O15118 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.49■□□□□ 0.71
NPC1O15118 COX11P1-201ENST00000489116 835 ntBASIC19.49■□□□□ 0.71
NPC1O15118 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
NPC1O15118 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.49■□□□□ 0.71
NPC1O15118 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1O15118 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.49■□□□□ 0.71
NPC1O15118 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPC1O15118 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.49■□□□□ 0.71
NPC1O15118 AC112907.3-201ENST00000577781 2400 ntBASIC19.49■□□□□ 0.71
NPC1O15118 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NPC1O15118 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 FAM8A6P-201ENST00000407496 1135 ntBASIC19.48■□□□□ 0.71
NPC1O15118 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NPC1O15118 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1O15118 AC022616.7-201ENST00000525383 220 ntBASIC19.48■□□□□ 0.71
NPC1O15118 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 AC087388.1-201ENST00000571370 1112 ntBASIC19.48■□□□□ 0.71
NPC1O15118 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 AC141257.4-201ENST00000634557 245 ntBASIC19.48■□□□□ 0.71
NPC1O15118 AC136944.6-201ENST00000634818 245 ntBASIC19.48■□□□□ 0.71
NPC1O15118 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1O15118 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.48■□□□□ 0.71
NPC1O15118 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NPC1O15118 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPC1O15118 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPC1O15118 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1O15118 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.47■□□□□ 0.71
NPC1O15118 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPC1O15118 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms