Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
CASQ2O14958 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.35■□□□□ 0.53
CASQ2O14958 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CASQ2O14958 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CASQ2O14958 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.34■□□□□ 0.53
CASQ2O14958 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.34■□□□□ 0.53
CASQ2O14958 AL512353.2-201ENST00000448759 1962 ntBASIC18.34■□□□□ 0.53
CASQ2O14958 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.34■□□□□ 0.53
CASQ2O14958 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.34■□□□□ 0.53
CASQ2O14958 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.34■□□□□ 0.53
CASQ2O14958 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.34■□□□□ 0.53
CASQ2O14958 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASQ2O14958 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
CASQ2O14958 PTBP1P-201ENST00000554374 1601 ntBASIC18.34■□□□□ 0.53
CASQ2O14958 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CASQ2O14958 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CASQ2O14958 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASQ2O14958 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASQ2O14958 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CASQ2O14958 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASQ2O14958 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASQ2O14958 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CASQ2O14958 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CASQ2O14958 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.33■□□□□ 0.53
CASQ2O14958 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASQ2O14958 PRORSD1P-202ENST00000563365 2154 ntBASIC18.33■□□□□ 0.52
CASQ2O14958 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.33■□□□□ 0.52
CASQ2O14958 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.33■□□□□ 0.52
CASQ2O14958 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.33■□□□□ 0.52
CASQ2O14958 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.33■□□□□ 0.52
CASQ2O14958 AC105233.4-201ENST00000642045 216 ntBASIC18.33■□□□□ 0.52
CASQ2O14958 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.33■□□□□ 0.52
CASQ2O14958 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CASQ2O14958 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.33■□□□□ 0.52
CASQ2O14958 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CASQ2O14958 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CASQ2O14958 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CASQ2O14958 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CASQ2O14958 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASQ2O14958 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.32■□□□□ 0.52
CASQ2O14958 AC139713.2-201ENST00000641328 2723 ntBASIC18.32■□□□□ 0.52
CASQ2O14958 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 PKD1P5-201ENST00000532415 10291 ntBASIC18.32■□□□□ 0.52
CASQ2O14958 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 KRT16P3-201ENST00000439127 1283 ntBASIC18.32■□□□□ 0.52
CASQ2O14958 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.32■□□□□ 0.52
CASQ2O14958 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.32■□□□□ 0.52
CASQ2O14958 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASQ2O14958 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CASQ2O14958 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CASQ2O14958 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.32■□□□□ 0.52
CASQ2O14958 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASQ2O14958 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CASQ2O14958 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.31■□□□□ 0.52
CASQ2O14958 ABALON-201ENST00000629058 1903 ntBASIC18.31■□□□□ 0.52
CASQ2O14958 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
CASQ2O14958 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CASQ2O14958 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.31■□□□□ 0.52
CASQ2O14958 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.31■□□□□ 0.52
CASQ2O14958 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.31■□□□□ 0.52
CASQ2O14958 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASQ2O14958 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms