Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NTN3O00634 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
NTN3O00634 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NTN3O00634 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NTN3O00634 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NTN3O00634 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NTN3O00634 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NTN3O00634 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NTN3O00634 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
NTN3O00634 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.31■□□□□ 0.52
NTN3O00634 AC069148.1-201ENST00000608741 768 ntBASIC18.31■□□□□ 0.52
NTN3O00634 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NTN3O00634 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.31■□□□□ 0.52
NTN3O00634 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
NTN3O00634 AL391422.3-201ENST00000603791 2761 ntBASIC18.3■□□□□ 0.52
NTN3O00634 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
NTN3O00634 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.3■□□□□ 0.52
NTN3O00634 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.3■□□□□ 0.52
NTN3O00634 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
NTN3O00634 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NTN3O00634 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.3■□□□□ 0.52
NTN3O00634 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NTN3O00634 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
NTN3O00634 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NTN3O00634 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.29■□□□□ 0.52
NTN3O00634 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NTN3O00634 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.29■□□□□ 0.52
NTN3O00634 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
NTN3O00634 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 SPDYE15P-201ENST00000424157 909 ntBASIC18.29■□□□□ 0.52
NTN3O00634 DUSP5P1-201ENST00000441325 1139 ntBASIC18.29■□□□□ 0.52
NTN3O00634 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.29■□□□□ 0.52
NTN3O00634 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 CR769767.2-201ENST00000622735 460 ntBASIC18.29■□□□□ 0.52
NTN3O00634 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NTN3O00634 LINC01311-201ENST00000565162 1445 ntBASIC18.29■□□□□ 0.52
NTN3O00634 ZNF815P-204ENST00000434898 1737 ntBASIC18.29■□□□□ 0.52
NTN3O00634 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.29■□□□□ 0.52
NTN3O00634 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.28■□□□□ 0.52
NTN3O00634 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.28■□□□□ 0.52
NTN3O00634 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NTN3O00634 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.28■□□□□ 0.52
NTN3O00634 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NTN3O00634 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NTN3O00634 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NTN3O00634 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NTN3O00634 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NTN3O00634 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NTN3O00634 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms