Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 FSCN1P1-201ENST00000568912 1481 ntBASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 LINC01568-207ENST00000641790 1380 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 FITM1-202ENST00000559294 800 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 AC145285.6-201ENST00000604632 637 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 AC005363.2-201ENST00000618631 242 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 AC131212.4-201ENST00000623606 975 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA3F8WFD2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA3F8WFD2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 TMPOP1-202ENST00000424642 1267 ntBASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NPIPA3F8WFD2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 RN7SL850P-201ENST00000579959 291 ntBASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA3F8WFD2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA3F8WFD2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms