Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 NAPSB-206ENST00000562112 1266 ntBASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA2E9PIF3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 LINC01568-207ENST00000641790 1380 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 FITM1-202ENST00000559294 800 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 AC145285.6-201ENST00000604632 637 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 AC005363.2-201ENST00000618631 242 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 AC131212.4-201ENST00000623606 975 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA2E9PIF3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA2E9PIF3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 TMPOP1-202ENST00000424642 1267 ntBASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NPIPA2E9PIF3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 RN7SL850P-201ENST00000579959 291 ntBASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA2E9PIF3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms