Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AL353708.3-201ENST00000610272 989 ntBASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AL445675.2-201ENST00000620291 557 ntBASIC17.11■□□□□ 0.33
NPIPB4C9JG80 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.11■□□□□ 0.33
NPIPB4C9JG80 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 AC006058.3-201ENST00000606217 1069 ntBASIC17.1■□□□□ 0.33
NPIPB4C9JG80 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB4C9JG80 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 POU5F1P3-201ENST00000428824 1078 ntBASIC17.09■□□□□ 0.33
NPIPB4C9JG80 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB4C9JG80 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPB4C9JG80 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.08■□□□□ 0.33
NPIPB4C9JG80 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 NIFKP9-201ENST00000419265 221 ntBASIC17.08■□□□□ 0.32
NPIPB4C9JG80 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 AC128676.1-201ENST00000454392 318 ntBASIC17.08■□□□□ 0.32
NPIPB4C9JG80 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB4C9JG80 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB4C9JG80 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB4C9JG80 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB4C9JG80 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB4C9JG80 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB4C9JG80 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms