Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
YJEFN3A6XGL0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 AC093484.2-201ENST00000580996 2166 ntBASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 AC007952.6-201ENST00000573168 2673 ntBASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 AC003957.1-201ENST00000625108 2673 ntBASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 AC079598.2-202ENST00000546624 1451 ntBASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
YJEFN3A6XGL0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YJEFN3A6XGL0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YJEFN3A6XGL0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.14■□□□□ 0.82
YJEFN3A6XGL0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
YJEFN3A6XGL0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
YJEFN3A6XGL0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 UNC93B2-201ENST00000285383 730 ntBASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 AP000525.1-201ENST00000608286 694 ntBASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YJEFN3A6XGL0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 BX088651.1-201ENST00000540551 451 ntBASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YJEFN3A6XGL0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms