Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 TERF1P2-201ENST00000583350 1212 ntBASIC20.85■□□□□ 0.93
USP27XA6NNY8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP27XA6NNY8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USP27XA6NNY8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 AC018553.1-201ENST00000616682 1458 ntBASIC20.84■□□□□ 0.93
USP27XA6NNY8 IRX1P1-201ENST00000438849 1838 ntBASIC20.84■□□□□ 0.93
USP27XA6NNY8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 HLA-G-202ENST00000376815 851 ntBASIC20.84■□□□□ 0.93
USP27XA6NNY8 HLA-G-203ENST00000376818 1127 ntBASIC20.84■□□□□ 0.93
USP27XA6NNY8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
USP27XA6NNY8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP27XA6NNY8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 AC099398.1-201ENST00000567919 2776 ntBASIC20.83■□□□□ 0.93
USP27XA6NNY8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 AL591742.1-201ENST00000604433 565 ntBASIC20.83■□□□□ 0.93
USP27XA6NNY8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
USP27XA6NNY8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP27XA6NNY8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP27XA6NNY8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.83■□□□□ 0.92
USP27XA6NNY8 ANO7L1-203ENST00000602586 1720 ntBASIC20.83■□□□□ 0.92
USP27XA6NNY8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP27XA6NNY8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP27XA6NNY8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.92
USP27XA6NNY8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP27XA6NNY8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
USP27XA6NNY8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP27XA6NNY8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.82■□□□□ 0.92
USP27XA6NNY8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.82■□□□□ 0.92
USP27XA6NNY8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.82■□□□□ 0.92
USP27XA6NNY8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.82■□□□□ 0.92
USP27XA6NNY8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP27XA6NNY8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP27XA6NNY8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP27XA6NNY8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 YBX1P1-201ENST00000445822 960 ntBASIC20.81■□□□□ 0.92
USP27XA6NNY8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.81■□□□□ 0.92
USP27XA6NNY8 KRT18P61-201ENST00000585825 1298 ntBASIC20.81■□□□□ 0.92
USP27XA6NNY8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms