Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 RARRES2P10-201ENST00000564312 460 ntBASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL031963.3-201ENST00000606441 850 ntBASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 AL049637.2-201ENST00000641778 930 ntBASIC15.52■□□□□ 0.08
TCRBV4S1A1TA0A5B7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV4S1A1TA0A5B7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AP001271.2-201ENST00000624018 1556 ntBASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TSPY7P-201ENST00000431358 1114 ntBASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC004264.1-201ENST00000608354 794 ntBASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV4S1A1TA0A5B7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV4S1A1TA0A5B7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms