Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF103-CHMP3A0A140T963 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 AC026185.1-201ENST00000445748 174 ntBASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF103-CHMP3A0A140T963 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 BX276092.2-201ENST00000417668 665 ntBASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF103-CHMP3A0A140T963 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 AL049812.1-201ENST00000432563 2267 ntBASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 GPX1P1-201ENST00000388829 606 ntBASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 MIR935-201ENST00000401179 91 ntBASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF103-CHMP3A0A140T963 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms