Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC062037.1-201ENST00000605302 128 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC099842.1-201ENST00000619919 596 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-228P-201ENST00000362700 106 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP478-201ENST00000364657 115 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNU6-1013P-201ENST00000384180 107 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP317-201ENST00000410176 116 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP311-201ENST00000411290 116 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RPL12P43-201ENST00000420608 499 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL139415.1-201ENST00000424862 352 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MTATP6P23-201ENST00000440153 476 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 BRK1P2-201ENST00000442875 223 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RPL7P59-201ENST00000447700 943 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC108463.1-201ENST00000450258 347 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RSU1P1-201ENST00000453416 441 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC104849.1-201ENST00000462623 405 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL603882.1-201ENST00000463059 681 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SETP11-201ENST00000473027 690 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 HMGN2P25-201ENST00000486956 268 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CYCTP-201ENST00000504253 315 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP315-201ENST00000516340 116 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP312-201ENST00000517068 116 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RN7SKP57-201ENST00000517248 293 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC010476.1-201ENST00000519111 851 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL953862.2-201ENST00000603089 820 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 DPPA3P3-201ENST00000603842 430 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC115621.1-201ENST00000604653 858 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LARP7P1-201ENST00000605576 316 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AP002802.2-201ENST00000605877 235 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC131902.3-201ENST00000611767 581 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC007275.1-201ENST00000621243 671 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC092656.1-203ENST00000624134 423 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC022819.1-201ENST00000563495 3910 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 MROH3P-201ENST00000435735 2676 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 RNA5SP509-201ENST00000364577 119 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 Z97832.1-201ENST00000402490 328 ntBASIC1.64□□□□□ -2.15
HMCN1Q96RW7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.64□□□□□ -2.15
HMCN1Q96RW7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms