Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC016065.2-201ENST00000514530 444 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC068587.4-201ENST00000533893 186 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC068993.1-201ENST00000546724 589 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC079075.1-201ENST00000559543 878 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 MIR4472-2-201ENST00000582069 67 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC012557.2-201ENST00000605919 418 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC113194.1-201ENST00000606037 500 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AL672167.1-205ENST00000641112 3080 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC104623.2-202ENST00000623477 4002 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 EIF2AP4-201ENST00000424793 1781 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 GVINP1-202ENST00000531871 7271 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 OR10J6P-201ENST00000289731 930 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 Y_RNA.51-201ENST00000362725 102 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RNU6-623P-201ENST00000363143 105 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RNU6-660P-201ENST00000364566 109 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RNVU1-6-201ENST00000364688 164 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MIR141-201ENST00000384975 95 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL121972.1-201ENST00000402023 252 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 VN1R8P-201ENST00000407739 893 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 CHEK2P3-201ENST00000416118 248 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 FNDC3CP-201ENST00000420795 1155 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL512649.1-201ENST00000428997 581 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 KCTD10P1-201ENST00000434203 625 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RPL7AP61-201ENST00000443410 636 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 BTF3P6-201ENST00000448054 499 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 KATNBL1P6-201ENST00000453433 915 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 USP9YP34-201ENST00000453983 808 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MTCO2P18-201ENST00000457151 658 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RPS4XP15-201ENST00000489210 795 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 TMEM251P1-201ENST00000503717 318 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RN7SKP277-201ENST00000516895 283 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 RN7SKP260-201ENST00000516907 149 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 PTP4A1P6-201ENST00000531034 478 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 BNIP3P1-201ENST00000547295 580 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL161713.1-201ENST00000555538 145 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MIR3936-201ENST00000584304 110 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MAGOH2P-202ENST00000584384 429 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC115286.1-201ENST00000604298 434 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC011626.1-201ENST00000604710 562 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 HULC.1-201ENST00000612720 240 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC108359.1-201ENST00000616451 1211 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AL356266.1-201ENST00000623311 483 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 CR383658.2-201ENST00000547576 1525 ntBASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC144BQ3MJ40 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms