Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 NIPA2P1-201ENST00000426223 976 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC008065.1-201ENST00000428525 348 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL049745.1-201ENST00000433953 286 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 RPS17P8-201ENST00000434525 335 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL451139.1-201ENST00000434718 346 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.07□□□□□ -1.6
ZBED1O96006 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.07□□□□□ -1.6
ZBED1O96006 MTND6P18-201ENST00000439477 513 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.07□□□□□ -1.6
ZBED1O96006 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZBED1O96006 RPS5P7-201ENST00000456664 608 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.07□□□□□ -1.6
ZBED1O96006 AC090686.1-201ENST00000481577 749 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZBED1O96006 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.07□□□□□ -1.6
ZBED1O96006 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.07□□□□□ -1.6
ZBED1O96006 RNU6-678P-201ENST00000516832 109 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 RNU6-709P-201ENST00000517257 104 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.07□□□□□ -1.6
ZBED1O96006 AP001880.2-201ENST00000538233 448 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC091515.1-201ENST00000548110 679 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.07□□□□□ -1.6
ZBED1O96006 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.07□□□□□ -1.6
ZBED1O96006 UBE2FP2-201ENST00000566646 462 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC022726.1-201ENST00000587475 207 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL512782.1-201ENST00000603093 364 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 Z94722.1-201ENST00000604328 474 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL163642.2-201ENST00000604722 1019 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AL391358.1-201ENST00000605342 190 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 FAM27B-201ENST00000610601 213 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC100827.5-201ENST00000615883 426 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC004943.3-201ENST00000624116 600 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC231657.1-201ENST00000624313 397 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 AC007671.2-201ENST00000637344 619 ntBASIC5.07□□□□□ -1.6
ZBED1O96006 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ZBED1O96006 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ZBED1O96006 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
ZBED1O96006 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ZBED1O96006 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.06□□□□□ -1.6
ZBED1O96006 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AL122126.1-201ENST00000546905 1318 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.06□□□□□ -1.6
ZBED1O96006 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 AC126323.6-202ENST00000568092 3511 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC103591.2-201ENST00000265259 766 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 RNU6-1226P-201ENST00000384317 107 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 MIR937-201ENST00000401271 86 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 RN7SKP247-201ENST00000411094 308 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 RN7SKP100-201ENST00000411258 284 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 RPS15AP38-201ENST00000413110 372 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 LINC00993-201ENST00000420453 540 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC090960.1-201ENST00000421072 306 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 AL365338.1-201ENST00000422282 858 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 OR2B7P-201ENST00000429302 934 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 NRBF2P3-201ENST00000432731 865 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 MTND4P6-201ENST00000438297 472 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 AL606662.1-201ENST00000445763 553 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 RPL26P28-201ENST00000451325 435 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 DDX39BP2-208ENST00000453923 258 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 RNF138P1-201ENST00000502765 546 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 MTCYBP17-201ENST00000503579 789 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.06□□□□□ -1.6
ZBED1O96006 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.06□□□□□ -1.6
ZBED1O96006 OR7H2P-201ENST00000513483 306 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 AL389895.1-201ENST00000554127 252 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.06□□□□□ -1.6
ZBED1O96006 RN7SL802P-201ENST00000577858 299 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 AC121247.2-201ENST00000604776 136 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.06□□□□□ -1.6
ZBED1O96006 AL159169.3-201ENST00000608871 561 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC243773.3-201ENST00000613270 256 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC122133.1-201ENST00000613964 233 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 AC012414.7-202ENST00000622705 1090 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ZBED1O96006 MTCO1P14-201ENST00000441695 1559 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
ZBED1O96006 TLK1P1-201ENST00000456760 2440 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ZBED1O96006 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
ZBED1O96006 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ZBED1O96006 AC073429.2-201ENST00000569694 1444 ntBASIC5.06□□□□□ -1.6
ZBED1O96006 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ZBED1O96006 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ZBED1O96006 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ZBED1O96006 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms