Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DOBP13765 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DOBP13765 CPHL1P-201ENST00000461341 3407 ntBASIC4.04□□□□□ -1.76
HLA-DOBP13765 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DOBP13765 AL445523.1-201ENST00000451184 1362 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AP000526.1-201ENST00000603308 1388 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 RNU6-582P-201ENST00000362989 107 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 RNU5D-1-201ENST00000363299 116 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 Y_RNA.311-201ENST00000365068 96 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SUGT1P1-201ENST00000379514 476 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SNORD116-9-201ENST00000384000 95 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SNORA70F-201ENST00000384142 135 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SNORD116-3-201ENST00000384287 95 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SNORD116-7-201ENST00000384404 95 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 SNORD116-5-201ENST00000384462 95 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 RN7SKP182-201ENST00000410772 298 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AL139128.1-201ENST00000413921 941 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 SEPT2P1-201ENST00000419651 180 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 RPS26P40-201ENST00000435209 294 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOBP13765 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 RNU6-885P-201ENST00000516607 104 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 HMGB1P19-201ENST00000517578 577 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AF279873.1-201ENST00000523393 313 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 AP001189.2-201ENST00000527320 189 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 ATP5J2P6-201ENST00000565203 266 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 HMGB2P1-201ENST00000591146 634 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC006539.2-201ENST00000601729 572 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 PSMA6P4-201ENST00000603247 718 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC105129.3-201ENST00000605455 485 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AP002360.3-201ENST00000607673 710 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC122133.1-201ENST00000613964 233 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 MIR7703-201ENST00000620784 77 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC073348.1-201ENST00000623002 331 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC091905.2-201ENST00000623143 306 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOBP13765 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOBP13765 AC021755.1-201ENST00000559747 1447 ntBASIC4.03□□□□□ -1.76
HLA-DOBP13765 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOBP13765 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DOBP13765 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOBP13765 LINC00622-201ENST00000562811 1570 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOBP13765 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOBP13765 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOBP13765 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOBP13765 AL391994.1-201ENST00000254724 282 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 AC103591.2-201ENST00000265259 766 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 RNU6-553P-201ENST00000364047 96 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 SNORD113.2-201ENST00000364166 89 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 RNVU1-6-201ENST00000364688 164 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 SNORD116-23-201ENST00000384645 92 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 MIR92A2-201ENST00000385299 75 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 AL133264.1-201ENST00000407157 562 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 RNU2-42P-201ENST00000410697 113 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 SKP1P3-201ENST00000429280 487 ntBASIC4.02□□□□□ -1.77
HLA-DOBP13765 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOBP13765 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms