Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC106872.2-201ENST00000494303 480 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC007458.1-201ENST00000542812 373 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 ELOCP34-201ENST00000604436 327 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC010200.2-201ENST00000605098 235 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AL592494.3-201ENST00000609485 464 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC244258.1-201ENST00000637553 1071 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC007390.2-201ENST00000606229 3803 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 HSPA8P1-201ENST00000425843 1833 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC009313.2-201ENST00000417893 1941 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 MIR30E-201ENST00000362104 92 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 MIR200C-201ENST00000384980 68 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 ATP5F1P3-201ENST00000397213 657 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 Z98941.1-201ENST00000407764 100 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC127526.1-201ENST00000417526 366 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 RPL23AP4-201ENST00000427757 463 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AP000907.1-201ENST00000428428 510 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 BTG3P1-201ENST00000435859 716 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 EXTL2P1-201ENST00000446218 416 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 RPL26P28-201ENST00000451325 435 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC091564.1-201ENST00000464563 479 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC020893.1-201ENST00000502452 580 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 IGKV2-26-201ENST00000518305 343 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 U3.45-201ENST00000607547 219 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC127502.3-201ENST00000636170 1206 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HLA-DQB2P05538 AL356274.2-201ENST00000624379 3752 ntBASIC3.47□□□□□ -1.85
HLA-DQB2P05538 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HLA-DQB2P05538 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.85
HLA-DQB2P05538 OR10AB1P-202ENST00000641219 1686 ntBASIC3.46□□□□□ -1.85
HLA-DQB2P05538 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 MIR490-201ENST00000384865 128 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC069157.1-201ENST00000421749 137 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 FTH1P6-201ENST00000430768 320 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC097262.1-201ENST00000452559 548 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 CLIC4P1-201ENST00000453177 535 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC069277.2-201ENST00000454211 432 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC006499.5-201ENST00000505037 514 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 MIR2276-201ENST00000516886 89 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 CBX3P5-201ENST00000552017 521 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC005476.1-201ENST00000554427 397 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 AC123786.2-201ENST00000603459 275 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 SNORA35B-201ENST00000607417 129 ntBASIC3.46□□□□□ -1.86
HLA-DQB2P05538 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
HLA-DQB2P05538 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms