Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC068790.3-201ENST00000602988 553 ntBASIC5.25□□□□□ -1.57
SHISA3A0PJX4 Z98200.1-201ENST00000607298 470 ntBASIC5.25□□□□□ -1.57
SHISA3A0PJX4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 uc_338.12-201ENST00000616344 181 ntBASIC5.25□□□□□ -1.57
SHISA3A0PJX4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHISA3A0PJX4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 PROS2P-201ENST00000474651 1951 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RNU6-1160P-201ENST00000384546 104 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AL353133.1-201ENST00000407695 401 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RN7SKP235-201ENST00000410662 305 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 CHEK2P3-201ENST00000416118 248 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RPL31P45-201ENST00000419532 356 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 NMD3P2-201ENST00000421815 761 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 PTPN2P1-201ENST00000423212 1072 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ERLEC1P1-201ENST00000433806 578 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC138761.5-201ENST00000433967 325 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 Z80107.2-201ENST00000445127 392 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 snoU13.8-201ENST00000458890 104 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 Y_RNA.639-201ENST00000458981 102 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC087879.1-201ENST00000474343 374 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC055855.1-201ENST00000489563 579 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RN7SL612P-201ENST00000497704 295 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 RNA5SP206-201ENST00000516703 121 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC131935.1-201ENST00000524621 333 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 OR6R2P-201ENST00000609216 300 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AP002512.4-202ENST00000641599 4530 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.24□□□□□ -1.57
SHISA3A0PJX4 AC024651.2-201ENST00000562480 2098 ntBASIC5.24□□□□□ -1.57
SHISA3A0PJX4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 AC130650.2-201ENST00000618736 2403 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 AC010329.2-201ENST00000595195 2737 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 AC073343.1-201ENST00000328239 651 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 RN7SKP185-201ENST00000362813 326 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 SNORD42.2-201ENST00000365570 69 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHISA3A0PJX4 RNU6-1207P-201ENST00000384343 107 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 MIR551B-201ENST00000384984 96 ntBASIC5.23□□□□□ -1.57
SHISA3A0PJX4 MIR514A2-201ENST00000385131 88 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms