Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 NXPH1-205ENST00000602349 1953 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC244517.1-201ENST00000606030 2086 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC068769.1-201ENST00000474767 2426 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC005225.5-201ENST00000623547 2225 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 SNORA70.9-201ENST00000384370 135 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-308P-201ENST00000390957 107 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-1304P-201ENST00000411374 106 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL137792.2-201ENST00000443484 235 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RAC1P7-201ENST00000445367 377 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL23AP43-201ENST00000446445 471 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 SLAMF6P1-201ENST00000451067 602 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 MTND1P9-201ENST00000453775 944 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 BTF3P15-201ENST00000455606 336 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RPSAP24-201ENST00000461543 873 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL135752.1-201ENST00000479477 471 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.654-201ENST00000497848 106 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SKP24-201ENST00000515888 284 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 SCARNA5-201ENST00000516201 276 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-566P-201ENST00000516790 107 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL117187.1-201ENST00000555482 181 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR4420-201ENST00000583944 77 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL7AP69-201ENST00000595306 806 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 VN1R107P-201ENST00000601784 209 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL049794.2-201ENST00000616301 365 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 RMST_9.1-201ENST00000619945 193 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL138713.1-201ENST00000624026 2130 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AL132640.3-201ENST00000630473 177 ntBASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGA11Q9Y5H2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC018628.1-201ENST00000624147 3819 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.112-201ENST00000363250 102 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.452-201ENST00000384202 108 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF37CP-201ENST00000406795 241 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AF228730.2-201ENST00000438784 848 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 TXNP1-201ENST00000441872 371 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 DNAJC19P5-201ENST00000443295 316 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms