Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC020904.2-201ENST00000621646 1669 ntTSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SSBP3-AS1-201ENST00000361350 2624 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 C3P1-202ENST00000497718 4954 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CCR9-202ENST00000357632 2569 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC091544.5-201ENST00000620192 3815 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 AC100788.2-201ENST00000625199 2889 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 ALDH7A1P1-201ENST00000510973 1533 ntBASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC1.76□□□□□ -2.13
KRTAP4-4Q9BYR3 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 BTN3A2-204ENST00000396948 1494 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL136964.1-201ENST00000622038 2990 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CD274-201ENST00000381573 3343 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HCAR2-201ENST00000328880 2051 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AK2-215ENST00000629371 3576 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms