Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC087369.1-201ENST00000520775 996 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC007458.1-201ENST00000542812 373 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC8.05□□□□□ -1.12
CD44P16070 AC090615.1-201ENST00000577519 154 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC138904.2-201ENST00000614412 107 ntBASIC8.05□□□□□ -1.12
CD44P16070 AC240442.1-201ENST00000616055 283 ntBASIC8.05□□□□□ -1.12
CD44P16070 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 AC073488.3-201ENST00000631611 778 ntBASIC8.05□□□□□ -1.12
CD44P16070 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
CD44P16070 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CD44P16070 AC015871.3-201ENST00000618835 2261 ntBASIC8.05□□□□□ -1.12
CD44P16070 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CD44P16070 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CD44P16070 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CD44P16070 RAD17P1-201ENST00000418130 2042 ntBASIC8.05□□□□□ -1.12
CD44P16070 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.05□□□□□ -1.12
CD44P16070 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
CD44P16070 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 UBE2WP1-201ENST00000362030 340 ntBASIC8.04□□□□□ -1.12
CD44P16070 SNORA25.1-201ENST00000362326 128 ntBASIC8.04□□□□□ -1.12
CD44P16070 Y_RNA.262-201ENST00000364641 102 ntBASIC8.04□□□□□ -1.12
CD44P16070 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 HSPA8P15-201ENST00000401676 786 ntBASIC8.04□□□□□ -1.12
CD44P16070 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC8.04□□□□□ -1.12
CD44P16070 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.04□□□□□ -1.12
CD44P16070 AC023141.9-201ENST00000458734 412 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC010326.1-201ENST00000462726 602 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC127024.1-201ENST00000490847 418 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC8.04□□□□□ -1.12
CD44P16070 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC8.04□□□□□ -1.12
CD44P16070 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.04□□□□□ -1.12
CD44P16070 AC089984.3-201ENST00000552838 363 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC023824.2-201ENST00000566185 400 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC097381.3-201ENST00000608962 462 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC243654.2-201ENST00000612843 443 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC8.04□□□□□ -1.12
CD44P16070 AL353898.2-201ENST00000623000 255 ntBASIC8.04□□□□□ -1.12
CD44P16070 AC008785.1-201ENST00000624475 456 ntBASIC8.04□□□□□ -1.12
CD44P16070 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC8.04□□□□□ -1.12
CD44P16070 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CD44P16070 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 CASC19-246ENST00000641625 1606 ntBASIC8.03□□□□□ -1.12
CD44P16070 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.03□□□□□ -1.12
CD44P16070 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 HYDIN2-203ENST00000614586 13885 ntBASIC8.03□□□□□ -1.12
CD44P16070 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CD44P16070 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CD44P16070 RNA5SP260-201ENST00000363849 111 ntBASIC8.03□□□□□ -1.12
CD44P16070 RNU6-1289P-201ENST00000384431 106 ntBASIC8.03□□□□□ -1.12
CD44P16070 SNORA35-201ENST00000386104 128 ntBASIC8.03□□□□□ -1.12
CD44P16070 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CD44P16070 AL357139.1-201ENST00000407792 426 ntBASIC8.03□□□□□ -1.12
CD44P16070 AC009237.9-201ENST00000414800 347 ntBASIC8.03□□□□□ -1.12
CD44P16070 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.03□□□□□ -1.12
CD44P16070 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.03□□□□□ -1.12
CD44P16070 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.03□□□□□ -1.12
CD44P16070 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC8.03□□□□□ -1.12
CD44P16070 RN7SL251P-201ENST00000464175 297 ntBASIC8.03□□□□□ -1.12
CD44P16070 RN7SL223P-201ENST00000470401 294 ntBASIC8.03□□□□□ -1.12
CD44P16070 RPS10P20-201ENST00000494130 463 ntBASIC8.03□□□□□ -1.12
CD44P16070 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 AC138866.1-201ENST00000514522 497 ntBASIC8.03□□□□□ -1.12
CD44P16070 AC025755.1-201ENST00000521306 278 ntBASIC8.03□□□□□ -1.12
CD44P16070 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 HSPE1P2-201ENST00000554777 306 ntBASIC8.03□□□□□ -1.12
CD44P16070 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.03□□□□□ -1.12
CD44P16070 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.03□□□□□ -1.12
CD44P16070 AL354702.2-202ENST00000641481 890 ntBASIC8.03□□□□□ -1.12
CD44P16070 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CD44P16070 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CD44P16070 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms