Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C1DP2-201ENST00000418167 426 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 OR6D1P-201ENST00000436165 939 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 RPL23AP15-201ENST00000450202 459 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AP006222.1-205ENST00000450734 457 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AL590365.1-201ENST00000450788 243 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 ACTR3P3-201ENST00000480448 893 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AC022447.3-201ENST00000506865 495 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC114781.3-201ENST00000512083 142 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 ARL2BPP6-201ENST00000512757 439 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 SNORA18.6-201ENST00000516792 115 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 SOD1P3-201ENST00000518682 454 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 EIF5A2P1-201ENST00000564027 460 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AC092121.1-201ENST00000569452 202 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 AP001180.3-201ENST00000582221 145 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 MIR544B-201ENST00000582372 78 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 AC092954.2-201ENST00000609103 430 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 AP003400.3-201ENST00000624904 346 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 CR392039.4-201ENST00000624968 501 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.38□□□□□ -1.55
COL6A2P12110 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 HSPA8P17-201ENST00000427029 1382 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
COL6A2P12110 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
COL6A2P12110 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 SRRM1P3-201ENST00000426911 2678 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC005005.4-201ENST00000623789 16698 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC092079.1-201ENST00000558620 1985 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.37□□□□□ -1.55
COL6A2P12110 OR4A15-201ENST00000314706 1035 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 OR11H4-201ENST00000315409 1082 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 OR9K1P-201ENST00000326513 941 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 RNU4-44P-201ENST00000363050 141 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 RNA5SP394-201ENST00000364216 119 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 Y_RNA.372-201ENST00000365599 102 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 SNRPEP2-201ENST00000397592 279 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 HMGB1P20-201ENST00000402555 677 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 Y_RNA.608-201ENST00000410647 95 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC004690.1-201ENST00000418216 328 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 MTND4LP10-201ENST00000435146 291 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 HMGB1P31-201ENST00000437242 427 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 LSM1P1-201ENST00000438629 273 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC073909.1-201ENST00000447112 999 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 PRPF38AP1-201ENST00000451976 933 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 VDAC2P4-201ENST00000452925 711 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 RNU6-1218P-201ENST00000458990 108 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC022133.1-201ENST00000490961 571 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL6A2P12110 ENPP7P11-201ENST00000505915 627 ntBASIC5.37□□□□□ -1.55
COL6A2P12110 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.37□□□□□ -1.55
COL6A2P12110 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.37□□□□□ -1.55
COL6A2P12110 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.37□□□□□ -1.55
COL6A2P12110 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms