Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 AOX3P-204ENST00000491025 2107 ntBASIC6.73□□□□□ -1.33
EFCC1Q9HA90 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EFCC1Q9HA90 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 SPATA2P1-201ENST00000431223 2055 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 SPA17P1-201ENST00000416656 452 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 BOLA3P4-201ENST00000418151 400 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 PDCL2P1-201ENST00000419302 352 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC113412.1-201ENST00000425840 504 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 HMGN2P27-201ENST00000427352 270 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 GPM6BP2-201ENST00000432046 144 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MTCYBP6-201ENST00000441810 138 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 GPM6BP1-201ENST00000446387 144 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 RPL7P59-201ENST00000447700 943 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 FRG2FP-204ENST00000453982 852 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 RPL18AP17-201ENST00000455326 198 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 RN7SL352P-201ENST00000466002 277 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 RPS21P4-201ENST00000487122 248 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 RPL39P36-201ENST00000490784 156 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 KCTD9P5-201ENST00000504141 1170 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 SCARNA6.1-201ENST00000516989 238 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 IGHV3-63-201ENST00000518422 341 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MRPS16P1-201ENST00000523462 412 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 HSPA8P13-201ENST00000523715 472 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AL512310.1-201ENST00000548639 172 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 NMNAT1P1-201ENST00000554095 876 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC009852.2-201ENST00000567898 485 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AL355375.2-201ENST00000574825 175 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MIR3691-201ENST00000578066 90 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MIR4646-201ENST00000580775 63 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MIR4436B2-201ENST00000581415 91 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MIR4436B1-201ENST00000583272 91 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC022916.3-201ENST00000592961 742 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC087763.1-201ENST00000603391 286 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC090525.3-201ENST00000605601 189 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 AC092692.1-201ENST00000623625 2595 ntBASIC6.72□□□□□ -1.33
EFCC1Q9HA90 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EFCC1Q9HA90 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 AC245100.2-201ENST00000454544 1679 ntBASIC6.71□□□□□ -1.33
EFCC1Q9HA90 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 MTCO1P7-201ENST00000419523 1542 ntBASIC6.71□□□□□ -1.33
EFCC1Q9HA90 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
EFCC1Q9HA90 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 RNU6-462P-201ENST00000362659 105 ntBASIC6.71□□□□□ -1.34
EFCC1Q9HA90 RNU6-582P-201ENST00000362989 107 ntBASIC6.71□□□□□ -1.34
EFCC1Q9HA90 U8.4-201ENST00000363626 134 ntBASIC6.71□□□□□ -1.34
EFCC1Q9HA90 RNU6-532P-201ENST00000384318 107 ntBASIC6.71□□□□□ -1.34
EFCC1Q9HA90 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.71□□□□□ -1.34
EFCC1Q9HA90 BX890604.2-201ENST00000427883 474 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms