Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP47Q96K76 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP47Q96K76 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP47Q96K76 RNA5SP235-201ENST00000365411 114 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.89□□□□□ -1.63
USP47Q96K76 AC115115.1-201ENST00000449927 248 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.89□□□□□ -1.63
USP47Q96K76 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.89□□□□□ -1.63
USP47Q96K76 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.89□□□□□ -1.63
USP47Q96K76 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP47Q96K76 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.89□□□□□ -1.63
USP47Q96K76 CYP2C60P-201ENST00000566088 139 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 MIR4738-201ENST00000579134 87 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.89□□□□□ -1.63
USP47Q96K76 AL713998.2-201ENST00000604538 1198 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 RMST_9.1-201ENST00000619945 193 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 AC127502.3-201ENST00000636170 1206 ntBASIC4.89□□□□□ -1.63
USP47Q96K76 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.88□□□□□ -1.63
USP47Q96K76 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.88□□□□□ -1.63
USP47Q96K76 RPL5P24-201ENST00000463742 885 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 AC017015.1-201ENST00000477387 286 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 AGGF1P3-201ENST00000493675 1213 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 MIR7851-201ENST00000610611 160 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 AL158196.1-201ENST00000616786 434 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 AL645937.1-201ENST00000641739 1652 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 CEP170P1-201ENST00000502249 4587 ntBASIC4.88□□□□□ -1.63
USP47Q96K76 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.88□□□□□ -1.63
USP47Q96K76 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USP47Q96K76 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
USP47Q96K76 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.87□□□□□ -1.63
USP47Q96K76 NMD3P1-201ENST00000439704 1488 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
USP47Q96K76 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 RNU1-33P-201ENST00000364249 162 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 RN7SKP111-201ENST00000410349 271 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 RNU2-22P-201ENST00000411266 212 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.87□□□□□ -1.63
USP47Q96K76 RPL26P28-201ENST00000451325 435 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.87□□□□□ -1.63
USP47Q96K76 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.87□□□□□ -1.63
USP47Q96K76 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.87□□□□□ -1.63
USP47Q96K76 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 AC067838.1-201ENST00000606064 577 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 MIR8058-201ENST00000615737 89 ntBASIC4.87□□□□□ -1.63
USP47Q96K76 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP47Q96K76 AC245100.2-201ENST00000454544 1679 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP47Q96K76 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP47Q96K76 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 RNU6-249P-201ENST00000363016 102 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP47Q96K76 AL136116.1-201ENST00000403591 381 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 HSFY4P-201ENST00000415994 1181 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 AL035458.1-201ENST00000433096 585 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 ACTG1P13-201ENST00000486987 1043 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 AC098799.1-201ENST00000504752 800 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 AC025423.2-201ENST00000537570 439 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.86□□□□□ -1.63
USP47Q96K76 AC079880.2-201ENST00000603790 1213 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP47Q96K76 ZNF833P-201ENST00000424938 1494 ntBASIC4.86□□□□□ -1.63
USP47Q96K76 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.86□□□□□ -1.63
USP47Q96K76 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 RSL24D1P1-201ENST00000404972 493 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.85□□□□□ -1.63
USP47Q96K76 PTP4A1P1-201ENST00000420539 515 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.85□□□□□ -1.63
USP47Q96K76 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.85□□□□□ -1.63
USP47Q96K76 AP000563.1-201ENST00000490865 758 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 AC093663.1-201ENST00000497190 394 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms