Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.65□□□□□ -1.67
PTPN9P43378 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.65□□□□□ -1.67
PTPN9P43378 AC093755.1-201ENST00000512950 1023 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 RNA5SP135-201ENST00000517019 125 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 HIGD1AP6-201ENST00000521833 279 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 NBEAP1-201ENST00000554452 979 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.65□□□□□ -1.67
PTPN9P43378 AC087465.1-201ENST00000560574 245 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 RPL23AP97-201ENST00000568955 471 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.65□□□□□ -1.67
PTPN9P43378 AC008759.1-201ENST00000589783 983 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC096553.1-201ENST00000605169 829 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC020634.1-201ENST00000608701 549 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC097478.2-201ENST00000610572 514 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC107075.1-201ENST00000613695 314 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC022509.4-201ENST00000621404 572 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC007546.2-201ENST00000623996 360 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 AL353743.4-201ENST00000422653 1547 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 AC105074.1-201ENST00000623380 3095 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.65□□□□□ -1.67
PTPN9P43378 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 RAD17P1-201ENST00000418130 2042 ntBASIC4.65□□□□□ -1.67
PTPN9P43378 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTPN9P43378 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
PTPN9P43378 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
PTPN9P43378 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN9P43378 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
PTPN9P43378 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN9P43378 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 FAM133CP-201ENST00000332869 704 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RNU6-1214P-201ENST00000363650 109 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PTPN9P43378 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 RNU6-83P-201ENST00000384568 112 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RNU6-178P-201ENST00000384631 104 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RNA5SP372-201ENST00000390836 115 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AL121834.1-202ENST00000404494 277 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RNU6-603P-201ENST00000411403 107 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AL008987.1-201ENST00000415528 237 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC069213.2-201ENST00000420238 366 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 RPS12P5-201ENST00000423449 371 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC009965.2-201ENST00000425328 970 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 USP9YP31-201ENST00000431405 881 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 COX7BP2-201ENST00000437976 242 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC114495.1-201ENST00000441274 436 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 MTCYBP11-201ENST00000447254 1109 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.64□□□□□ -1.67
PTPN9P43378 AC012158.1-204ENST00000483430 465 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC007686.1-201ENST00000488511 463 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AP000563.1-201ENST00000490865 758 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.64□□□□□ -1.67
PTPN9P43378 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.64□□□□□ -1.67
PTPN9P43378 HMGB3P13-201ENST00000511263 607 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.64□□□□□ -1.67
PTPN9P43378 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PTPN9P43378 AC004217.3-201ENST00000551552 878 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AGGF1P6-201ENST00000569213 976 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.64□□□□□ -1.67
PTPN9P43378 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.64□□□□□ -1.67
PTPN9P43378 AP003973.1-201ENST00000604639 691 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 DPRXP5-201ENST00000604662 539 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC091979.2-201ENST00000607514 214 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC012409.3-201ENST00000611343 981 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC105227.2-201ENST00000615075 605 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 AC123768.4-201ENST00000616244 701 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTPN9P43378 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PTPN9P43378 AC092435.4-201ENST00000623012 4159 ntBASIC4.64□□□□□ -1.67
PTPN9P43378 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 USP9YP4-201ENST00000424401 1745 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.63□□□□□ -1.67
PTPN9P43378 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
PTPN9P43378 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PTPN9P43378 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTPN9P43378 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PTPN9P43378 RNU6-839P-201ENST00000363347 108 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 Y_RNA.465-201ENST00000384293 102 ntBASIC4.63□□□□□ -1.67
PTPN9P43378 RNU5A-2P-201ENST00000384337 116 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms