Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RSL24D1P2-201ENST00000445584 366 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AC011037.1-201ENST00000483964 558 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXA9P31269 AC108941.1-201ENST00000502853 530 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 DSTNP2-201ENST00000504533 515 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 SNORA48.9-201ENST00000516419 162 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA9P31269 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA9P31269 GNRHR2P1-201ENST00000555315 631 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA9P31269 AC005412.1-201ENST00000580812 1049 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 MIR7975-201ENST00000619350 68 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AC015722.2-201ENST00000622210 551 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 AL357559.1-201ENST00000622228 274 ntBASIC3.97□□□□□ -1.77
HOXA9P31269 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA9P31269 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXA9P31269 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA9P31269 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA9P31269 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXA9P31269 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA9P31269 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HOXA9P31269 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXA9P31269 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA9P31269 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 DHFRP5-201ENST00000406944 564 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 RPL31P52-201ENST00000407532 367 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 RPL7P53-201ENST00000421245 739 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 CYCSP4-201ENST00000429682 331 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXA9P31269 RPS3AP12-201ENST00000443616 753 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 RPL7P24-201ENST00000493052 752 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 WBP1LP4-201ENST00000505043 344 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXA9P31269 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXA9P31269 AC017100.2-201ENST00000584628 355 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AC068790.5-201ENST00000602741 355 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL159169.3-201ENST00000608871 561 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL713922.2-201ENST00000619384 716 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXA9P31269 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA9P31269 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA9P31269 AC073346.2-201ENST00000624724 2058 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 AL139811.1-201ENST00000424779 2299 ntBASIC3.96□□□□□ -1.78
HOXA9P31269 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA9P31269 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXA9P31269 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 MIR483-201ENST00000385070 76 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA9P31269 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 AC009965.2-201ENST00000425328 970 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 AL159987.2-201ENST00000432754 307 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 Z85994.2-201ENST00000434327 452 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA9P31269 AC092641.1-201ENST00000440229 772 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 XKRYP6-201ENST00000440468 1116 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 XKRYP3-201ENST00000442113 1116 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 RPL21P23-201ENST00000446654 460 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 AC073387.1-201ENST00000453261 709 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA9P31269 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 PLGLA-201ENST00000465668 449 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 CAB39P1-201ENST00000502277 460 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA9P31269 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 AC006960.3-201ENST00000561845 705 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA9P31269 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA9P31269 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA9P31269 ABI1P1-201ENST00000603375 1120 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 SNORA62.6-201ENST00000606322 83 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AC020658.4-201ENST00000613987 684 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 AC095038.2-201ENST00000621464 1070 ntBASIC3.95□□□□□ -1.78
HOXA9P31269 C2orf27A-204ENST00000623058 969 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms