Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 HMGB1P16-201ENST00000447155 540 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AP000942.1-201ENST00000463969 747 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 VPS26AP1-201ENST00000483197 979 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AP002812.1-201ENST00000495378 474 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 DYNLL1P6-201ENST00000503440 264 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 FTH1P24-201ENST00000503502 462 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC048346.1-201ENST00000510247 144 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 SNORA67.7-201ENST00000516664 135 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC074029.1-201ENST00000552531 1044 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 MIR3912-201ENST00000577566 105 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC022069.1-201ENST00000582910 658 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AL020997.3-201ENST00000602843 359 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 AC016877.3-201ENST00000606778 504 ntBASIC4.95□□□□□ -1.62
HERC6Q8IVU3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HERC6Q8IVU3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 SPRR2C-201ENST00000290702 219 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC011155.1-201ENST00000316512 456 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 Y_RNA.472-201ENST00000384322 102 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 ATP5F1P3-201ENST00000397213 657 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC006946.1-201ENST00000429106 328 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AL132765.1-201ENST00000434165 553 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC084290.1-201ENST00000434995 374 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC007327.1-201ENST00000447461 264 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC104306.1-201ENST00000449702 371 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 HMGN3P1-201ENST00000453847 193 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC041039.1-201ENST00000485656 536 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 RNA5SP135-201ENST00000517019 125 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC092747.2-201ENST00000545069 983 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AL158211.1-201ENST00000566763 763 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 MTND3P13-201ENST00000574391 343 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC006133.1-201ENST00000617106 264 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 AC009452.1-201ENST00000640823 606 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HERC6Q8IVU3 DDX18P5-201ENST00000534547 1306 ntBASIC4.94□□□□□ -1.62
HERC6Q8IVU3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC107068.1-201ENST00000563286 4218 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 RNU6-413P-201ENST00000384115 107 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 PPIAP31-201ENST00000405422 495 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 RNU6-628P-201ENST00000410675 107 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms