Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MIR4480-201ENST00000582492 71 ntBASIC4.68□□□□□ -1.66
CD53P19397 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.68□□□□□ -1.66
CD53P19397 MIR4509-2-201ENST00000583920 94 ntBASIC4.68□□□□□ -1.66
CD53P19397 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.68□□□□□ -1.66
CD53P19397 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.68□□□□□ -1.66
CD53P19397 AC069307.1-201ENST00000602820 447 ntBASIC4.68□□□□□ -1.66
CD53P19397 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.68□□□□□ -1.66
CD53P19397 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.68□□□□□ -1.66
CD53P19397 AL590282.1-201ENST00000610379 1136 ntBASIC4.68□□□□□ -1.66
CD53P19397 AC087683.2-201ENST00000611384 326 ntBASIC4.68□□□□□ -1.66
CD53P19397 AC026368.1-201ENST00000614934 690 ntBASIC4.68□□□□□ -1.66
CD53P19397 MIR4509-1-201ENST00000618224 94 ntBASIC4.68□□□□□ -1.66
CD53P19397 AC022106.2-201ENST00000620114 757 ntBASIC4.68□□□□□ -1.66
CD53P19397 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.68□□□□□ -1.66
CD53P19397 AC074101.1-201ENST00000637861 241 ntBASIC4.68□□□□□ -1.66
CD53P19397 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.68□□□□□ -1.66
CD53P19397 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD53P19397 ECM1P2-201ENST00000503354 1577 ntBASIC4.68□□□□□ -1.66
CD53P19397 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CD53P19397 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD53P19397 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD53P19397 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD53P19397 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.68□□□□□ -1.66
CD53P19397 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 MTCO1P23-201ENST00000415223 1526 ntBASIC4.67□□□□□ -1.66
CD53P19397 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD53P19397 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD53P19397 AC017104.4-201ENST00000636283 1592 ntBASIC4.67□□□□□ -1.66
CD53P19397 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 AC008033.1-201ENST00000216407 1162 ntBASIC4.67□□□□□ -1.66
CD53P19397 RNA5SP235-201ENST00000365411 114 ntBASIC4.67□□□□□ -1.66
CD53P19397 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD53P19397 SNORA51.8-201ENST00000384234 132 ntBASIC4.67□□□□□ -1.66
CD53P19397 RNU1-149P-201ENST00000390870 161 ntBASIC4.67□□□□□ -1.66
CD53P19397 AL078599.1-201ENST00000402075 293 ntBASIC4.67□□□□□ -1.66
CD53P19397 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.67□□□□□ -1.66
CD53P19397 RNU2-42P-201ENST00000410697 113 ntBASIC4.67□□□□□ -1.66
CD53P19397 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.67□□□□□ -1.66
CD53P19397 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.67□□□□□ -1.66
CD53P19397 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 TPTE2P3-201ENST00000441562 1189 ntBASIC4.67□□□□□ -1.66
CD53P19397 MTCYBP11-201ENST00000447254 1109 ntBASIC4.67□□□□□ -1.66
CD53P19397 AL121877.1-201ENST00000453704 622 ntBASIC4.67□□□□□ -1.66
CD53P19397 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 AC068587.2-201ENST00000478386 781 ntBASIC4.67□□□□□ -1.66
CD53P19397 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 RPS3AP6-201ENST00000484430 795 ntBASIC4.67□□□□□ -1.66
CD53P19397 AC007686.1-201ENST00000488511 463 ntBASIC4.67□□□□□ -1.66
CD53P19397 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 HMGB1P44-201ENST00000508597 572 ntBASIC4.67□□□□□ -1.66
CD53P19397 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
CD53P19397 RNU6-1225P-201ENST00000516336 65 ntBASIC4.67□□□□□ -1.66
CD53P19397 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.67□□□□□ -1.66
CD53P19397 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 MED28P5-201ENST00000528254 438 ntBASIC4.67□□□□□ -1.66
CD53P19397 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CD53P19397 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD53P19397 AC125611.1-201ENST00000549563 229 ntBASIC4.67□□□□□ -1.66
CD53P19397 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.67□□□□□ -1.66
CD53P19397 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD53P19397 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.67□□□□□ -1.66
CD53P19397 AGGF1P5-201ENST00000567900 919 ntBASIC4.67□□□□□ -1.66
CD53P19397 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.67□□□□□ -1.66
CD53P19397 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 VN1R83P-201ENST00000595685 445 ntBASIC4.67□□□□□ -1.66
CD53P19397 BNIP3P38-201ENST00000601117 544 ntBASIC4.67□□□□□ -1.66
CD53P19397 RPL23AP92-201ENST00000603609 255 ntBASIC4.67□□□□□ -1.66
CD53P19397 AL138478.1-201ENST00000612252 832 ntBASIC4.67□□□□□ -1.66
CD53P19397 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.67□□□□□ -1.66
CD53P19397 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.67□□□□□ -1.66
CD53P19397 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD53P19397 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.66□□□□□ -1.66
CD53P19397 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD53P19397 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
CD53P19397 RNU5D-1-201ENST00000363299 116 ntBASIC4.66□□□□□ -1.66
CD53P19397 RNU4-4P-201ENST00000364588 130 ntBASIC4.66□□□□□ -1.66
CD53P19397 UBBP2-201ENST00000376781 231 ntBASIC4.66□□□□□ -1.66
CD53P19397 RNU6-629P-201ENST00000384061 103 ntBASIC4.66□□□□□ -1.66
CD53P19397 SNORA16A-201ENST00000384342 137 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms