Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
APOBP04114 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 NMD3P1-201ENST00000439704 1488 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC005261.6-201ENST00000623072 1387 ntBASIC2.1□□□□□ -2.07
APOBP04114 RNU1-108P-201ENST00000362556 161 ntBASIC2.1□□□□□ -2.07
APOBP04114 RN7SKP222-201ENST00000410651 315 ntBASIC2.1□□□□□ -2.07
APOBP04114 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 AC069285.2-201ENST00000440210 275 ntBASIC2.1□□□□□ -2.07
APOBP04114 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBP04114 OR6R2P-201ENST00000609216 300 ntBASIC2.1□□□□□ -2.07
APOBP04114 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBP04114 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 AC083843.3-201ENST00000623679 2186 ntBASIC2.09□□□□□ -2.07
APOBP04114 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 NPM1P48-201ENST00000436002 853 ntBASIC2.09□□□□□ -2.07
APOBP04114 TXNP1-201ENST00000441872 371 ntBASIC2.09□□□□□ -2.07
APOBP04114 PSMC1P13-201ENST00000458195 985 ntBASIC2.09□□□□□ -2.07
APOBP04114 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 AC108022.1-201ENST00000493466 478 ntBASIC2.09□□□□□ -2.07
APOBP04114 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.09□□□□□ -2.07
APOBP04114 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
APOBP04114 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 AL672296.1-201ENST00000427780 2158 ntBASIC2.09□□□□□ -2.07
APOBP04114 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 AL359693.1-201ENST00000614959 2407 ntBASIC2.09□□□□□ -2.07
APOBP04114 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 AC006971.1-201ENST00000407916 4486 ntBASIC2.09□□□□□ -2.07
APOBP04114 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.09□□□□□ -2.07
APOBP04114 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 RNU1-140P-201ENST00000365040 165 ntBASIC2.09□□□□□ -2.07
APOBP04114 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.09□□□□□ -2.07
APOBP04114 SNORA18.3-201ENST00000384122 132 ntBASIC2.09□□□□□ -2.07
APOBP04114 RSL24D1P1-201ENST00000404972 493 ntBASIC2.09□□□□□ -2.07
APOBP04114 EEF1A1P41-201ENST00000414667 207 ntBASIC2.09□□□□□ -2.07
APOBP04114 ELOCP8-201ENST00000439309 332 ntBASIC2.09□□□□□ -2.07
APOBP04114 ELOCP15-201ENST00000442090 332 ntBASIC2.09□□□□□ -2.07
APOBP04114 RNU1-143P-201ENST00000516296 146 ntBASIC2.09□□□□□ -2.07
APOBP04114 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.09□□□□□ -2.07
APOBP04114 CYCSP39-201ENST00000565821 309 ntBASIC2.09□□□□□ -2.07
APOBP04114 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.09□□□□□ -2.07
APOBP04114 U1.23-201ENST00000610293 146 ntBASIC2.09□□□□□ -2.07
APOBP04114 RNU1-68P-201ENST00000615382 146 ntBASIC2.09□□□□□ -2.07
APOBP04114 U1.39-201ENST00000621562 146 ntBASIC2.09□□□□□ -2.07
APOBP04114 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
APOBP04114 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.09□□□□□ -2.07
APOBP04114 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.09□□□□□ -2.07
APOBP04114 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.09□□□□□ -2.07
APOBP04114 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
APOBP04114 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
APOBP04114 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.09□□□□□ -2.08
APOBP04114 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.09□□□□□ -2.08
APOBP04114 OR2A20P-203ENST00000498397 1268 ntBASIC2.09□□□□□ -2.08
APOBP04114 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 AC125336.1-201ENST00000508893 2827 ntBASIC2.09□□□□□ -2.08
APOBP04114 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
APOBP04114 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
APOBP04114 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
APOBP04114 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
APOBP04114 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.08□□□□□ -2.08
APOBP04114 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
APOBP04114 AL138885.1-201ENST00000405921 675 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC073508.1-201ENST00000428866 656 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC093156.1-201ENST00000440382 670 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC104058.1-201ENST00000448028 297 ntBASIC2.08□□□□□ -2.08
APOBP04114 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 RPS20P32-201ENST00000456044 356 ntBASIC2.08□□□□□ -2.08
APOBP04114 RPL31P50-201ENST00000471002 296 ntBASIC2.08□□□□□ -2.08
APOBP04114 RPS26P15-201ENST00000488067 348 ntBASIC2.08□□□□□ -2.08
APOBP04114 AL035404.1-201ENST00000497982 568 ntBASIC2.08□□□□□ -2.08
APOBP04114 RNU6-513P-201ENST00000516104 104 ntBASIC2.08□□□□□ -2.08
APOBP04114 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.08□□□□□ -2.08
APOBP04114 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.08□□□□□ -2.08
APOBP04114 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 AP006437.1-201ENST00000641440 3685 ntBASIC2.08□□□□□ -2.08
APOBP04114 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
APOBP04114 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms