Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 NDUFB4P12-201ENST00000513465 390 ntBASIC4.7□□□□□ -1.66
MSI1O43347 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.7□□□□□ -1.66
MSI1O43347 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.7□□□□□ -1.66
MSI1O43347 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 AP003461.1-201ENST00000528866 78 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MSI1O43347 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MSI1O43347 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.7□□□□□ -1.66
MSI1O43347 AC087465.1-201ENST00000560574 245 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.7□□□□□ -1.66
MSI1O43347 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 Z99497.2-201ENST00000603634 310 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AL451064.1-201ENST00000607718 471 ntBASIC4.7□□□□□ -1.66
MSI1O43347 MIR378J-201ENST00000611988 109 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AC234782.5-201ENST00000617723 324 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AP005019.3-201ENST00000620418 560 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AC006840.1-201ENST00000623069 542 ntBASIC4.7□□□□□ -1.66
MSI1O43347 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.7□□□□□ -1.66
MSI1O43347 AF001550.2-201ENST00000636643 217 ntBASIC4.7□□□□□ -1.66
MSI1O43347 AC103706.2-201ENST00000638080 240 ntBASIC4.7□□□□□ -1.66
MSI1O43347 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MSI1O43347 SGO1P1-201ENST00000603525 1447 ntBASIC4.7□□□□□ -1.66
MSI1O43347 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MSI1O43347 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MSI1O43347 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MSI1O43347 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.7□□□□□ -1.66
MSI1O43347 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
MSI1O43347 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MSI1O43347 IL6STP1-201ENST00000346911 1020 ntBASIC4.69□□□□□ -1.66
MSI1O43347 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 AL590290.1-201ENST00000405336 380 ntBASIC4.69□□□□□ -1.66
MSI1O43347 RNU2-6P-201ENST00000411404 190 ntBASIC4.69□□□□□ -1.66
MSI1O43347 USP9YP26-201ENST00000421008 661 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC090960.1-201ENST00000421072 306 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC007435.1-201ENST00000421086 415 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC011233.1-201ENST00000422812 283 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AL365396.1-201ENST00000430854 671 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.69□□□□□ -1.66
MSI1O43347 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.69□□□□□ -1.66
MSI1O43347 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.69□□□□□ -1.66
MSI1O43347 UBE2D3P1-201ENST00000436669 444 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.69□□□□□ -1.66
MSI1O43347 HMGB1P48-201ENST00000446155 598 ntBASIC4.69□□□□□ -1.66
MSI1O43347 RPL23AP43-201ENST00000446445 471 ntBASIC4.69□□□□□ -1.66
MSI1O43347 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 RPL7AP28-201ENST00000464513 571 ntBASIC4.69□□□□□ -1.66
MSI1O43347 RPL23AP12-201ENST00000467573 473 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC108751.2-201ENST00000469993 231 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC007537.2-201ENST00000472093 511 ntBASIC4.69□□□□□ -1.66
MSI1O43347 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 IGBP1P5-201ENST00000507524 1000 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC021146.3-201ENST00000511911 260 ntBASIC4.69□□□□□ -1.66
MSI1O43347 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC135279.1-201ENST00000543493 504 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC008015.1-201ENST00000555505 465 ntBASIC4.69□□□□□ -1.66
MSI1O43347 DUXAP1-201ENST00000556632 463 ntBASIC4.69□□□□□ -1.66
MSI1O43347 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
MSI1O43347 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.69□□□□□ -1.66
MSI1O43347 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 AC010620.1-201ENST00000601088 1102 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AL022161.1-201ENST00000604390 213 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AL392048.1-201ENST00000613946 534 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC009318.3-201ENST00000616916 503 ntBASIC4.69□□□□□ -1.66
MSI1O43347 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 AC097461.1-201ENST00000568928 2821 ntBASIC4.69□□□□□ -1.66
MSI1O43347 AC025031.4-201ENST00000621248 3271 ntBASIC4.69□□□□□ -1.66
MSI1O43347 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MSI1O43347 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.69□□□□□ -1.66
MSI1O43347 DCAF13P3-201ENST00000561147 1334 ntBASIC4.69□□□□□ -1.66
MSI1O43347 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.69□□□□□ -1.66
MSI1O43347 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
MSI1O43347 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MSI1O43347 AL606537.1-201ENST00000607258 2011 ntBASIC4.68□□□□□ -1.66
MSI1O43347 MTND5P31-201ENST00000419366 1374 ntBASIC4.68□□□□□ -1.66
MSI1O43347 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
MSI1O43347 RNU1-130P-201ENST00000363930 160 ntBASIC4.68□□□□□ -1.66
MSI1O43347 RNU6-560P-201ENST00000364007 108 ntBASIC4.68□□□□□ -1.66
MSI1O43347 RNU6-619P-201ENST00000365146 108 ntBASIC4.68□□□□□ -1.66
MSI1O43347 SKINT1L-201ENST00000401057 817 ntBASIC4.68□□□□□ -1.66
MSI1O43347 RNA5SP146-201ENST00000410743 123 ntBASIC4.68□□□□□ -1.66
MSI1O43347 RNU4-72P-201ENST00000410754 173 ntBASIC4.68□□□□□ -1.66
MSI1O43347 ELOCP19-201ENST00000411919 318 ntBASIC4.68□□□□□ -1.66
MSI1O43347 TMSB10P2-201ENST00000416049 131 ntBASIC4.68□□□□□ -1.66
MSI1O43347 MFSD13B-201ENST00000420133 1290 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms